BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033629
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative ...   329   5e-88
ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal doma...   322   8e-86
ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal doma...   321   2e-85
ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal doma...   318   8e-85
dbj|BAJ87495.1| predicted protein [Hordeum vulgare subsp. vulgare]    280   4e-73

>ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
           gi|223534449|gb|EEF36151.1| RNA polymerase II ctd
           phosphatase, putative [Ricinus communis]
          Length = 478

 Score =  329 bits (844), Expect = 5e-88
 Identities = 178/323 (55%), Positives = 216/323 (66%), Gaps = 20/323 (6%)
 Frame = -2

Query: 910 SGDDFASFLDAELDS---TSDTSPEPVXXXXXXXXXXD---------------SELFSTX 785
           S DDFA+ LDAELDS   +SD+SP+ +          D               S++ +  
Sbjct: 16  SSDDFAALLDAELDSKSSSSDSSPKAIKHDDASDANDDVNEEEEEEESDSDDDSDIATNR 75

Query: 784 XXXXXXXXXXV--DPYGSTSRGAEKKLEASIEEDICTHPGVIGGMCIRCGQKTDEEQSGV 611
                        +P  ST    ++ L AS  +  CTHPG  G MCI CG++  EE +GV
Sbjct: 76  IKRSRVETLENGENPKESTRVSLDQTLVASSSKVACTHPGSFGDMCILCGERLIEE-TGV 134

Query: 610 AFGYIHKDLRLANDEIARLRNNDLKNLFRHKKXXXXXXXXXXXXNSTQFRHITPEEEYLR 431
            FGYIHK LRLANDEI RLRN D+KNL RH+K            NSTQ  H+T EEEYL+
Sbjct: 135 TFGYIHKGLRLANDEIVRLRNTDMKNLLRHRKLYLVLDLDHTLLNSTQLMHLTAEEEYLK 194

Query: 430 MPPDSLPDALKGNLFRLDFMHMMTKLRPFVRTFLKEASKLFEMYIYTMGERAYALEMARL 251
              DS+ D   G+LF +DFMHMMTKLRPF+RTFLKEAS++FEMYIYTMG+RAYALEMA+ 
Sbjct: 195 SQIDSMQDVSNGSLFMVDFMHMMTKLRPFIRTFLKEASQMFEMYIYTMGDRAYALEMAKF 254

Query: 250 LDPENIYFNSKVIAQGDCTQRHQKGLDVVVGQDSAVLILDDTEQVWSKHKENLILMERYH 71
           LDP   YFN++VI++ D TQRHQKGLD+V+GQ+SAVLILDDTE  W+KHK+NLILMERYH
Sbjct: 255 LDPGREYFNARVISRDDGTQRHQKGLDIVLGQESAVLILDDTENAWTKHKDNLILMERYH 314

Query: 70  YFVSSYRQFGFNCKSRSELKCDE 2
           +F SS RQFGF CKS S+LK DE
Sbjct: 315 FFASSCRQFGFECKSLSQLKSDE 337


>ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 442

 Score =  322 bits (825), Expect = 8e-86
 Identities = 176/306 (57%), Positives = 213/306 (69%), Gaps = 3/306 (0%)
 Frame = -2

Query: 910 SGDDFASFLDAELDSTS-DTSPEPVXXXXXXXXXXDSELFSTXXXXXXXXXXXVDPYGST 734
           S DDF +FLDAELD++S D+SP+              +   +            +  GST
Sbjct: 13  SSDDFIAFLDAELDASSPDSSPDK-------EVVKQDDELQSVRTKRRKFESIEETEGST 65

Query: 733 SRGAEKK-LEASIEEDIC-THPGVIGGMCIRCGQKTDEEQSGVAFGYIHKDLRLANDEIA 560
           S G  K+ LEAS E D+C THPG  G MCIRCGQK D E SGV FGYIHK LRL ++EI+
Sbjct: 66  SEGIVKRSLEASSEVDVCCTHPGSFGNMCIRCGQKLDGE-SGVTFGYIHKGLRLHDEEIS 124

Query: 559 RLRNNDLKNLFRHKKXXXXXXXXXXXXNSTQFRHITPEEEYLRMPPDSLPDALKGNLFRL 380
           RLRN D+K+L   KK            NST    +T EE +L    DSL +  KG+LF+L
Sbjct: 125 RLRNTDMKSLLGRKKLYLVLDLDHTLLNSTHLAQLTSEELHLLNQTDSLTNVSKGSLFKL 184

Query: 379 DFMHMMTKLRPFVRTFLKEASKLFEMYIYTMGERAYALEMARLLDPENIYFNSKVIAQGD 200
           + M+MMTKLRPFVR FLKEAS++FEMYIYTMG+R YALEMA+LLDP+  YFN+KVI++ D
Sbjct: 185 EHMNMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYFNAKVISRDD 244

Query: 199 CTQRHQKGLDVVVGQDSAVLILDDTEQVWSKHKENLILMERYHYFVSSYRQFGFNCKSRS 20
            TQ+HQKGLDVV+GQ+SAV+ILDDTE  W KHK+NLILMERYH+F SS RQFGFNCKS +
Sbjct: 245 GTQKHQKGLDVVLGQESAVIILDDTEHAWMKHKDNLILMERYHFFGSSCRQFGFNCKSLA 304

Query: 19  ELKCDE 2
           ELK DE
Sbjct: 305 ELKSDE 310


>ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Cucumis sativus]
          Length = 452

 Score =  321 bits (822), Expect = 2e-85
 Identities = 173/304 (56%), Positives = 208/304 (68%), Gaps = 1/304 (0%)
 Frame = -2

Query: 910 SGDDFASFLDAELDS-TSDTSPEPVXXXXXXXXXXDSELFSTXXXXXXXXXXXVDPYGST 734
           S DDFA+FL  +LDS +SD+SP+            D+   S                   
Sbjct: 13  SSDDFAAFLAVDLDSHSSDSSPDE-------ETEGDNNAESVRIKRRKVEKLENSEEDIM 65

Query: 733 SRGAEKKLEASIEEDICTHPGVIGGMCIRCGQKTDEEQSGVAFGYIHKDLRLANDEIARL 554
               E+ LE   ++ +C+HPG  G MCI CGQ+ DEE SGV FGYIHK+LRL NDEI R+
Sbjct: 66  HEVEEQSLEVLSKQQLCSHPGSFGNMCIICGQRLDEE-SGVTFGYIHKELRLNNDEINRM 124

Query: 553 RNNDLKNLFRHKKXXXXXXXXXXXXNSTQFRHITPEEEYLRMPPDSLPDALKGNLFRLDF 374
           RN ++K L + KK            NST+ R++T EEEYLR   DSL D  KG+LF L+ 
Sbjct: 125 RNKEMKELLQRKKLILVLDLDHTLLNSTELRYLTVEEEYLRSQTDSLDDVTKGSLFLLNS 184

Query: 373 MHMMTKLRPFVRTFLKEASKLFEMYIYTMGERAYALEMARLLDPENIYFNSKVIAQGDCT 194
           +H MTKLRPFV +FLKEASKLFEMYIYTMGER YA EMA+LLDP+  YF+SKVI++ D T
Sbjct: 185 VHTMTKLRPFVHSFLKEASKLFEMYIYTMGERRYAFEMAKLLDPKKEYFSSKVISRDDGT 244

Query: 193 QRHQKGLDVVVGQDSAVLILDDTEQVWSKHKENLILMERYHYFVSSYRQFGFNCKSRSEL 14
           Q+HQKGLDVV+G++SAVLILDDTE  W+KHKENLILMERYH+F SS RQFGFNCKS SEL
Sbjct: 245 QKHQKGLDVVLGKESAVLILDDTENAWTKHKENLILMERYHFFASSCRQFGFNCKSLSEL 304

Query: 13  KCDE 2
           K DE
Sbjct: 305 KNDE 308


>ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 428

 Score =  318 bits (816), Expect = 8e-85
 Identities = 177/306 (57%), Positives = 210/306 (68%), Gaps = 3/306 (0%)
 Frame = -2

Query: 910 SGDDFASFLDAELDSTS-DTSPEPVXXXXXXXXXXDSELFSTXXXXXXXXXXXVDPYGST 734
           S DDF +FLDAELD++S D+SP+            D EL S                G  
Sbjct: 13  SSDDFIAFLDAELDASSPDSSPDK-----EVEKQDDDELES----------------GIK 51

Query: 733 SRGAE--KKLEASIEEDICTHPGVIGGMCIRCGQKTDEEQSGVAFGYIHKDLRLANDEIA 560
            R  E  ++ E S  E +CTHPG  G MCIRCGQK D E SGV FGYIHK LRL ++EI+
Sbjct: 52  RRKFESIEETEGSTSEGVCTHPGSFGNMCIRCGQKLDGE-SGVTFGYIHKGLRLHDEEIS 110

Query: 559 RLRNNDLKNLFRHKKXXXXXXXXXXXXNSTQFRHITPEEEYLRMPPDSLPDALKGNLFRL 380
           RLRN D+K+L   KK            NST   H+T EE +L    DSL D  KG+LF+L
Sbjct: 111 RLRNTDMKSLLCRKKLYLVLDLDHTLLNSTHLAHLTSEESHLLNQTDSLRDVSKGSLFKL 170

Query: 379 DFMHMMTKLRPFVRTFLKEASKLFEMYIYTMGERAYALEMARLLDPENIYFNSKVIAQGD 200
           + M+MMTKLRPFVR FLKEAS++FEMYIYTMG+R YALEMA+LLDP+  YFN+KVI++ D
Sbjct: 171 EHMNMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYFNAKVISRDD 230

Query: 199 CTQRHQKGLDVVVGQDSAVLILDDTEQVWSKHKENLILMERYHYFVSSYRQFGFNCKSRS 20
            TQ+HQKGLDVV+GQ+SAVLILDDTE  W KHK+NLILMERYH+F SS RQFGFNCKS +
Sbjct: 231 GTQKHQKGLDVVLGQESAVLILDDTEHAWMKHKDNLILMERYHFFGSSCRQFGFNCKSLA 290

Query: 19  ELKCDE 2
           ELK DE
Sbjct: 291 ELKSDE 296


>dbj|BAJ87495.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score =  280 bits (715), Expect = 4e-73
 Identities = 159/318 (50%), Positives = 195/318 (61%), Gaps = 17/318 (5%)
 Frame = -2

Query: 904 DDFASFLDAELD-------------STSDTSPEPVXXXXXXXXXXDSELFSTXXXXXXXX 764
           +DFA+ LDAELD             STS TS +               +  +        
Sbjct: 19  EDFAALLDAELDLASAVDSASAGDPSTSPTSSDDEEDDDEDVVSDVETVEQSSAKRRKVK 78

Query: 763 XXXVDPYGSTSRGAEKKLEA--SIEEDICT-HPGVIGGMCIRCGQKTDEEQ-SGVAFGYI 596
               D   +T+R  E  + +    +  IC  HPG  GG+C RCG++ DEE   GVAFGY+
Sbjct: 79  VQHQDRE-TTTRPDEDSIGSFKDAQIKICPPHPGFFGGLCFRCGKRQDEEDVPGVAFGYV 137

Query: 595 HKDLRLANDEIARLRNNDLKNLFRHKKXXXXXXXXXXXXNSTQFRHITPEEEYLRMPPDS 416
           HK LRL   EI RLR +DLKNL R +K            NST+   I+  E  L +   +
Sbjct: 138 HKGLRLGTSEIDRLRGSDLKNLLRERKLILILDLDHTLINSTKLHDISAAENNLGIQAAA 197

Query: 415 LPDALKGNLFRLDFMHMMTKLRPFVRTFLKEASKLFEMYIYTMGERAYALEMARLLDPEN 236
             D   G+LF L+ M M+TKLRPFVR FLKEAS +FEMYIYTMG++AYA+E+A+LLDP N
Sbjct: 198 SKDDPNGSLFTLEGMQMLTKLRPFVRKFLKEASNMFEMYIYTMGDKAYAIEIAKLLDPRN 257

Query: 235 IYFNSKVIAQGDCTQRHQKGLDVVVGQDSAVLILDDTEQVWSKHKENLILMERYHYFVSS 56
           +YFNSKVI+  DCTQRHQKGLD+V+G +S  +ILDDTE VW KHKENLILMERYHYF SS
Sbjct: 258 VYFNSKVISNSDCTQRHQKGLDMVLGAESVAVILDDTEYVWQKHKENLILMERYHYFASS 317

Query: 55  YRQFGFNCKSRSELKCDE 2
            RQFGF+ KS SEL  DE
Sbjct: 318 CRQFGFSVKSLSELMQDE 335