BLASTX nr result

ID: Cnidium21_contig00033612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033612
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528849.1| serine-threonine protein kinase, plant-type,...    91   8e-17
emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]    86   3e-15
ref|XP_002322110.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002528851.1| serine-threonine protein kinase, plant-type,...    84   9e-15
ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine...    81   8e-14

>ref|XP_002528849.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223531700|gb|EEF33523.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 834

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 48/93 (51%), Positives = 57/93 (61%)
 Frame = +2

Query: 44  SLLNCTTMIFNFLRFNILLMLGTSTTFVYSFSNNVTDQQALLSFKYSITDDPSGVLDSWN 223
           SL      I + L F +L     S TF    +NN TD+ ALL FK  ITDDP GV+ SWN
Sbjct: 15  SLCRLLVAIIHLLSFTVL-----SATFAIGNANNQTDRLALLDFKDKITDDPLGVVSSWN 69

Query: 224 TSIQFCHWTGVTCSRTRQRVTALNLSSLHLVGT 322
            S+ FC W G+TCSR  QRVT L+LSSL L G+
Sbjct: 70  RSLHFCKWYGITCSRRHQRVTRLDLSSLKLSGS 102


>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
          Length = 1904

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/71 (57%), Positives = 49/71 (69%)
 Frame = +2

Query: 110 TSTTFVYSFSNNVTDQQALLSFKYSITDDPSGVLDSWNTSIQFCHWTGVTCSRTRQRVTA 289
           TS+T +Y    N TD+ ALL+ K  IT DP G+  SWN S+ FC+WTGVTC    QRV  
Sbjct: 60  TSSTILYG---NETDRLALLAIKAQITQDPLGITTSWNDSVHFCNWTGVTCGHRHQRVNT 116

Query: 290 LNLSSLHLVGT 322
           LNLSSLHLVG+
Sbjct: 117 LNLSSLHLVGS 127



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/46 (58%), Positives = 31/46 (67%)
 Frame = +2

Query: 185  ITDDPSGVLDSWNTSIQFCHWTGVTCSRTRQRVTALNLSSLHLVGT 322
            ITD P   + SWN S+ FC W GV+CS   QRVT LNL SL LVG+
Sbjct: 1064 ITDAPLRAMSSWNDSLHFCQWQGVSCSGRHQRVTVLNLHSLGLVGS 1109


>ref|XP_002322110.1| predicted protein [Populus trichocarpa] gi|222869106|gb|EEF06237.1|
           predicted protein [Populus trichocarpa]
          Length = 1023

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/92 (50%), Positives = 58/92 (63%)
 Frame = +2

Query: 47  LLNCTTMIFNFLRFNILLMLGTSTTFVYSFSNNVTDQQALLSFKYSITDDPSGVLDSWNT 226
           LLN +      L F I  +  T+ T  + F+N  TDQQALL+ K  I++DP   L SWN 
Sbjct: 5   LLNSSLWFLGILLF-INYIEATTVTATFGFTNQ-TDQQALLAIKDFISEDPFNSLSSWNN 62

Query: 227 SIQFCHWTGVTCSRTRQRVTALNLSSLHLVGT 322
           S+QFC W GVTC R  +RVT+LNLSSL L G+
Sbjct: 63  SLQFCSWQGVTCGRRHRRVTSLNLSSLKLAGS 94


>ref|XP_002528851.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223531702|gb|EEF33525.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 988

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/93 (47%), Positives = 54/93 (58%)
 Frame = +2

Query: 44  SLLNCTTMIFNFLRFNILLMLGTSTTFVYSFSNNVTDQQALLSFKYSITDDPSGVLDSWN 223
           SL +    IF  L F +L        F    +NN TD+ ALL FK  I DDP G++ SWN
Sbjct: 15  SLCSFVLAIFQLLSFAVL-----PAAFAMRSANNETDRLALLEFKDKIADDPLGMMSSWN 69

Query: 224 TSIQFCHWTGVTCSRTRQRVTALNLSSLHLVGT 322
           +S+ FC W GVTC R  QRVT L+L SL L G+
Sbjct: 70  SSLHFCQWHGVTCGRRHQRVTMLDLGSLKLSGS 102


>ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Vitis vinifera]
          Length = 1040

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 36/60 (60%), Positives = 43/60 (71%)
 Frame = +2

Query: 143 NVTDQQALLSFKYSITDDPSGVLDSWNTSIQFCHWTGVTCSRTRQRVTALNLSSLHLVGT 322
           N TD+ ALL+ K  IT DP G+  SWN S+ FC+WTGVTC    QRV  LNL+SLHLVG+
Sbjct: 37  NETDRLALLAIKAQITQDPLGITTSWNDSVHFCNWTGVTCGHRHQRVNTLNLNSLHLVGS 96


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