BLASTX nr result

ID: Cnidium21_contig00033606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033606
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFH54534.1| GRAS family protein, partial [Dimocarpus longan]       100   1e-19
ref|XP_002303565.1| GRAS family transcription factor [Populus tr...    95   1e-17
ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus commun...    93   3e-17
ref|XP_003525725.1| PREDICTED: scarecrow-like protein 28-like [G...    89   6e-16
ref|XP_002299559.1| GRAS family transcription factor [Populus tr...    89   6e-16

>gb|AFH54534.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 178

 Score =  100 bits (250), Expect = 1e-19
 Identities = 47/67 (70%), Positives = 56/67 (83%)
 Frame = -3

Query: 595 LMEPGGFRNMGITEREFLQSRMLLKMYPFDDYRVEKQVHDGSSALTLSWSDQPLYTVSAW 416
           +ME GGFR+MGI+EREFLQS+MLLKMY  ++Y V KQ  DG +ALTLSW DQ LYTVS W
Sbjct: 103 MMEQGGFRSMGISEREFLQSQMLLKMYSNENYSVRKQEQDGVAALTLSWLDQSLYTVSGW 162

Query: 415 APLDIAG 395
           AP+D+AG
Sbjct: 163 APVDVAG 169


>ref|XP_002303565.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222840997|gb|EEE78544.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 665

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 47/67 (70%), Positives = 54/67 (80%)
 Frame = -3

Query: 595 LMEPGGFRNMGITEREFLQSRMLLKMYPFDDYRVEKQVHDGSSALTLSWSDQPLYTVSAW 416
           LME GG R +GI ERE LQ++MLLKMY  D Y+V+KQ H+  +ALTLSW DQPLYTVSAW
Sbjct: 591 LMEQGGLRCVGIDEREMLQAQMLLKMYSCDSYKVKKQGHE-EAALTLSWLDQPLYTVSAW 649

Query: 415 APLDIAG 395
            PLDIAG
Sbjct: 650 TPLDIAG 656


>ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus communis]
           gi|223549613|gb|EEF51101.1| DELLA protein RGL1, putative
           [Ricinus communis]
          Length = 662

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/67 (67%), Positives = 55/67 (82%)
 Frame = -3

Query: 595 LMEPGGFRNMGITEREFLQSRMLLKMYPFDDYRVEKQVHDGSSALTLSWSDQPLYTVSAW 416
           LME GGFR MGI+ERE LQS+MLLKMY  +DYRV+++     +ALTLSW DQPLYT+SAW
Sbjct: 589 LMEQGGFRCMGISEREVLQSQMLLKMYSCEDYRVKER--QDRAALTLSWLDQPLYTISAW 646

Query: 415 APLDIAG 395
           AP+D+ G
Sbjct: 647 APVDVVG 653


>ref|XP_003525725.1| PREDICTED: scarecrow-like protein 28-like [Glycine max]
          Length = 664

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 40/66 (60%), Positives = 52/66 (78%)
 Frame = -3

Query: 595 LMEPGGFRNMGITEREFLQSRMLLKMYPFDDYRVEKQVHDGSSALTLSWSDQPLYTVSAW 416
           ++E GGFR MG+TERE  QS+MLLKMY  + Y V+KQ  +G++ +TLSW +QPLYTVSAW
Sbjct: 588 MVEQGGFRCMGVTERELSQSQMLLKMYSCESYSVKKQEKEGATGVTLSWLEQPLYTVSAW 647

Query: 415 APLDIA 398
            P+D A
Sbjct: 648 GPVDAA 653


>ref|XP_002299559.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222846817|gb|EEE84364.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 666

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 45/67 (67%), Positives = 53/67 (79%)
 Frame = -3

Query: 595 LMEPGGFRNMGITEREFLQSRMLLKMYPFDDYRVEKQVHDGSSALTLSWSDQPLYTVSAW 416
           LME GG R + I+ERE LQS++LLKMY  D Y+V+K   +G+ ALTLSW DQPLYTVSAW
Sbjct: 592 LMEQGGLRCLVISEREMLQSQILLKMYSCDSYQVKKHGQEGA-ALTLSWLDQPLYTVSAW 650

Query: 415 APLDIAG 395
            PLDIAG
Sbjct: 651 TPLDIAG 657


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