BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033574
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32673.3| unnamed protein product [Vitis vinifera]              190   5e-47
emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]   189   5e-47
ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containi...   190   5e-47
ref|NP_199060.3| pentatricopeptide repeat-containing protein [Ar...   171   1e-40
ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containi...   166   5e-39

>emb|CBI32673.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  190 bits (482), Expect(2) = 5e-47
 Identities = 90/136 (66%), Positives = 110/136 (80%)
 Frame = -3

Query: 496 CFRKCNRHKEVICLYIRMLELDIRPNEFTFGTVIPSSTTLKDLNLGKQFHGYAIKAGLAS 317
           CF + + H+E I  + RML L+I+PN+F+FGTVIPSST L+DLN G+Q H  AIK GL S
Sbjct: 366 CFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLES 425

Query: 316 NLFVGSVLLSLYAKLSTIEEAQRVFEDTRNPNVVSYTTLMCGYLEKRRFDDALSIFRAMP 137
           N+FVGS ++  YAKL++I EAQ+ FEDT  PNVVSYTTL+ GYL+K RFDDAL++FR MP
Sbjct: 426 NVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMP 485

Query: 136 ERNAVSWNAMISGYSQ 89
           ERN VSWNAMISGYSQ
Sbjct: 486 ERNVVSWNAMISGYSQ 501



 Score = 23.9 bits (50), Expect(2) = 5e-47
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 540 FDAHKVLDEKFKWNVVSASVIV 475
           +DA K+ DE   W+VVSA+  +
Sbjct: 343 WDACKLFDEVPNWDVVSATATI 364



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 39/114 (34%), Positives = 63/114 (55%)
 Frame = -3

Query: 475 HKEVICLYIRMLELDIRPNEFTFGTVIPSSTTLKDLNLGKQFHGYAIKAGLASNLFVGSV 296
           ++E + L++ ML     PNE TF   I +   +  L +G+ FHG A+K     ++F+G+ 
Sbjct: 505 NEEAVNLFVVMLREGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNS 564

Query: 295 LLSLYAKLSTIEEAQRVFEDTRNPNVVSYTTLMCGYLEKRRFDDALSIFRAMPE 134
           L+S YAK  ++EE+  VF      N+VS+  L+CGY    R  +A+  F  M +
Sbjct: 565 LVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQD 618


>emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
          Length = 795

 Score =  189 bits (479), Expect(2) = 5e-47
 Identities = 89/136 (65%), Positives = 110/136 (80%)
 Frame = -3

Query: 496 CFRKCNRHKEVICLYIRMLELDIRPNEFTFGTVIPSSTTLKDLNLGKQFHGYAIKAGLAS 317
           CF + + H+E I  + RML L+I+PN+F+FGTVIPS+T L+DLN G+Q H  AIK GL S
Sbjct: 342 CFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSATALQDLNSGRQLHACAIKMGLES 401

Query: 316 NLFVGSVLLSLYAKLSTIEEAQRVFEDTRNPNVVSYTTLMCGYLEKRRFDDALSIFRAMP 137
           N+FVGS ++  YAKL++I EAQ+ FEDT  PNVVSYTTL+ GYL+K RFDDAL++FR MP
Sbjct: 402 NVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRXMP 461

Query: 136 ERNAVSWNAMISGYSQ 89
           ERN VSWNAMISGYSQ
Sbjct: 462 ERNVVSWNAMISGYSQ 477



 Score = 25.0 bits (53), Expect(2) = 5e-47
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 546 ESFDAHKVLDEKFKWNVVSASVIV 475
           E +DA K+ DE   W+VVSA+  +
Sbjct: 317 ELWDACKLFDEVPNWDVVSATATI 340



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 39/114 (34%), Positives = 63/114 (55%)
 Frame = -3

Query: 475 HKEVICLYIRMLELDIRPNEFTFGTVIPSSTTLKDLNLGKQFHGYAIKAGLASNLFVGSV 296
           ++E + L++ ML     PNE TF   I +   +  L +G+ FHG A+K     ++F+G+ 
Sbjct: 481 NEEAVNLFVVMLREGXLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNS 540

Query: 295 LLSLYAKLSTIEEAQRVFEDTRNPNVVSYTTLMCGYLEKRRFDDALSIFRAMPE 134
           L+S YAK  ++EE+  VF      N+VS+  L+CGY    R  +A+  F  M +
Sbjct: 541 LVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQD 594


>ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
           mitochondrial-like [Vitis vinifera]
          Length = 538

 Score =  190 bits (482), Expect(2) = 5e-47
 Identities = 90/136 (66%), Positives = 110/136 (80%)
 Frame = -3

Query: 496 CFRKCNRHKEVICLYIRMLELDIRPNEFTFGTVIPSSTTLKDLNLGKQFHGYAIKAGLAS 317
           CF + + H+E I  + RML L+I+PN+F+FGTVIPSST L+DLN G+Q H  AIK GL S
Sbjct: 85  CFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLES 144

Query: 316 NLFVGSVLLSLYAKLSTIEEAQRVFEDTRNPNVVSYTTLMCGYLEKRRFDDALSIFRAMP 137
           N+FVGS ++  YAKL++I EAQ+ FEDT  PNVVSYTTL+ GYL+K RFDDAL++FR MP
Sbjct: 145 NVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMP 204

Query: 136 ERNAVSWNAMISGYSQ 89
           ERN VSWNAMISGYSQ
Sbjct: 205 ERNVVSWNAMISGYSQ 220



 Score = 23.9 bits (50), Expect(2) = 5e-47
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 540 FDAHKVLDEKFKWNVVSASVIV 475
           +DA K+ DE   W+VVSA+  +
Sbjct: 62  WDACKLFDEVPNWDVVSATATI 83



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 39/114 (34%), Positives = 63/114 (55%)
 Frame = -3

Query: 475 HKEVICLYIRMLELDIRPNEFTFGTVIPSSTTLKDLNLGKQFHGYAIKAGLASNLFVGSV 296
           ++E + L++ ML     PNE TF   I +   +  L +G+ FHG A+K     ++F+G+ 
Sbjct: 224 NEEAVNLFVVMLREGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNS 283

Query: 295 LLSLYAKLSTIEEAQRVFEDTRNPNVVSYTTLMCGYLEKRRFDDALSIFRAMPE 134
           L+S YAK  ++EE+  VF      N+VS+  L+CGY    R  +A+  F  M +
Sbjct: 284 LVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQD 337


>ref|NP_199060.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170829|sp|Q9FIH2.1|PP414_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g42450, mitochondrial; Flags: Precursor
           gi|9759481|dbj|BAB10486.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007429|gb|AED94812.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 517

 Score =  171 bits (432), Expect = 1e-40
 Identities = 84/135 (62%), Positives = 107/135 (79%)
 Frame = -3

Query: 493 FRKCNRHKEVICLYIRMLELDIRPNEFTFGTVIPSSTTLKDLNLGKQFHGYAIKAGLASN 314
           F K +RH E    + R+L L IRPNEFTFGTVI SSTT +D+ LGKQ H YA+K GLASN
Sbjct: 68  FVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASN 127

Query: 313 LFVGSVLLSLYAKLSTIEEAQRVFEDTRNPNVVSYTTLMCGYLEKRRFDDALSIFRAMPE 134
           +FVGS +L+ Y KLST+ +A+R F+DTR+PNVVS T L+ GYL+K  F++ALS+FRAMPE
Sbjct: 128 VFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPE 187

Query: 133 RNAVSWNAMISGYSQ 89
           R+ V+WNA+I G+SQ
Sbjct: 188 RSVVTWNAVIGGFSQ 202



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
 Frame = -3

Query: 493 FRKCNRHKEVICLYIRML-ELDIRPNEFTFGTVIPSSTTLKDLNLGKQFHGYAIK-AGLA 320
           F +  R++E +  ++ ML E  + PNE TF   I + + +     GK  H  AIK  G  
Sbjct: 200 FSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKR 259

Query: 319 SNLFVGSVLLSLYAKLSTIEEAQRVFE--DTRNPNVVSYTTLMCGYLEKRRFDDALSIFR 146
            N+FV + L+S Y+K   +E++   F   +    N+VS+ +++ GY    R ++A+++F 
Sbjct: 260 FNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFE 319

Query: 145 AM 140
            M
Sbjct: 320 KM 321


>ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
           mitochondrial-like [Cucumis sativus]
          Length = 516

 Score =  166 bits (419), Expect = 5e-39
 Identities = 83/137 (60%), Positives = 103/137 (75%)
 Frame = -3

Query: 496 CFRKCNRHKEVICLYIRMLELDIRPNEFTFGTVIPSSTTLKDLNLGKQFHGYAIKAGLAS 317
           C R+ ++H+E + L+  ML L++RPNEFTFGTVI S+  L D+++GKQ H  AIK GL S
Sbjct: 70  CARQ-HQHEEALSLFSAMLVLNLRPNEFTFGTVIQSAKALGDIHIGKQLHVCAIKTGLHS 128

Query: 316 NLFVGSVLLSLYAKLSTIEEAQRVFEDTRNPNVVSYTTLMCGYLEKRRFDDALSIFRAMP 137
           NLFVGS LL LY K+  IEEAQR FED + PNVVSYT+L+ GYL+  R  DAL +F  MP
Sbjct: 129 NLFVGSALLDLYVKVGVIEEAQRAFEDIKMPNVVSYTSLISGYLKIERIRDALRVFDEMP 188

Query: 136 ERNAVSWNAMISGYSQK 86
           ERN VSWN+MI G+SQK
Sbjct: 189 ERNVVSWNSMIGGFSQK 205



 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 37/139 (26%), Positives = 65/139 (46%)
 Frame = -3

Query: 493 FRKCNRHKEVICLYIRMLELDIRPNEFTFGTVIPSSTTLKDLNLGKQFHGYAIKAGLASN 314
           F +   +++ + L+I ML   I P + TF   I ++  +  + +G+ FH  A+K     +
Sbjct: 202 FSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAANIASIGIGRSFHACAVKFFGKLD 261

Query: 313 LFVGSVLLSLYAKLSTIEEAQRVFEDTRNPNVVSYTTLMCGYLEKRRFDDALSIFRAMPE 134
           +FV + L+S YAK  ++E++  VF                               + + E
Sbjct: 262 VFVSNSLISFYAKCGSMEDSLLVFN------------------------------KLLDE 291

Query: 133 RNAVSWNAMISGYSQKSLG 77
           RN VSWNA++SG++Q   G
Sbjct: 292 RNVVSWNAVLSGFAQNGRG 310