BLASTX nr result

ID: Cnidium21_contig00033559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033559
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820...    63   3e-08
gb|ACB45089.1| putative polyprotein [Solanum habrochaites]             63   3e-08
emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]    62   5e-08
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]    62   5e-08
emb|CAN66627.1| hypothetical protein VITISV_025008 [Vitis vinifera]    61   1e-07

>ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820591 [Glycine max]
          Length = 1057

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
 Frame = -3

Query: 327 PPRRSTRISKLPDYLNHYVHPLHAHXXXXXXXXXXXXXXXXXXSVPSTS---ICCNVNTS 157
           P RRST++S  P YL  +    H +                  S  S S     C +   
Sbjct: 436 PLRRSTKVSNTPKYLIDF----HCYNVTRTNKVTYPIQHHLDYSKLSNSHKHYICQI--- 488

Query: 156 FNNSKLEDPQTYEEAVVHPEWQQAIATEFSALEANNTWSIVPLPVGKK 13
              S+  +PQTY +A+ H  WQ+AI+TE  A+E N TW+IVP P GKK
Sbjct: 489 ---SENHEPQTYSQAIKHKPWQEAISTELMAMELNKTWTIVPFPQGKK 533


>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/112 (36%), Positives = 54/112 (48%)
 Frame = -3

Query: 348 FPQNTVPPPRRSTRISKLPDYLNHYVHPLHAHXXXXXXXXXXXXXXXXXXSVPSTSICCN 169
           F  +T    RRSTR SK P +L+ +VH +  H                  S  S S    
Sbjct: 606 FGTSTTTDLRRSTRSSKPPGWLHDFVH-IATHSPTSSLTCSTAHPLSSYMSYSSISTPY- 663

Query: 168 VNTSFNNSKLEDPQTYEEAVVHPEWQQAIATEFSALEANNTWSIVPLPVGKK 13
             +  N S + +P +Y EAV H  W QA+  E  AL  N+TW +VPLP+GKK
Sbjct: 664 FQSLCNFSAIPEPTSYNEAVQHSHWIQAMELELKALHDNHTWDLVPLPLGKK 715


>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
          Length = 1323

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = -3

Query: 150 NSKLEDPQTYEEAVVHPEWQQAIATEFSALEANNTWSIVPLPVGK 16
           +S + +P++Y EA  HPEWQ+A+ +E  AL+AN TWS+ PLP GK
Sbjct: 833 HSAVTEPRSYSEAAAHPEWQKAMRSELQALQANGTWSLTPLPAGK 877


>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = -3

Query: 150  NSKLEDPQTYEEAVVHPEWQQAIATEFSALEANNTWSIVPLPVGK 16
            +S + +P++Y EA  HPEWQ+A+ +E  AL+AN TWS+ PLP GK
Sbjct: 983  HSAVTEPRSYSEAAAHPEWQKAMRSELQALQANGTWSLTPLPAGK 1027


>emb|CAN66627.1| hypothetical protein VITISV_025008 [Vitis vinifera]
          Length = 770

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 23/45 (51%), Positives = 34/45 (75%)
 Frame = -3

Query: 150 NSKLEDPQTYEEAVVHPEWQQAIATEFSALEANNTWSIVPLPVGK 16
           +S + +P++Y +A  HPEWQ+A+ +E  AL+AN TWS+ PLP GK
Sbjct: 721 HSAVTEPRSYSKAAAHPEWQEAMRSELQALQANGTWSLTPLPAGK 765


Top