BLASTX nr result

ID: Cnidium21_contig00033547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033547
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communi...    91   1e-16
ref|XP_003625815.1| hypothetical protein MTR_7g104550 [Medicago ...    90   2e-16
ref|XP_004149209.1| PREDICTED: probable cytosolic iron-sulfur pr...    89   5e-16
ref|NP_001031421.1| transducin/WD-40 repeat-containing protein [...    87   1e-15
ref|NP_565615.1| transducin/WD-40 repeat-containing protein [Ara...    87   1e-15

>ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communis]
           gi|223531837|gb|EEF33655.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 349

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 39/68 (57%), Positives = 48/68 (70%)
 Frame = +3

Query: 147 IQKLEGHTGKVWSVAWNPVAGTDGTPAILASCSSDNTVRIWKQNPITSAFDCLATIRGAQ 326
           IQKL GHT +VWS+AWNP     G PA+ ASCS D TVRIW+Q+P + +FDC A +    
Sbjct: 13  IQKLHGHTDRVWSLAWNPATRFGGAPAVFASCSGDKTVRIWEQSPSSCSFDCKAVLEETH 72

Query: 327 TGTVRSCS 350
           T TVRSC+
Sbjct: 73  TRTVRSCA 80


>ref|XP_003625815.1| hypothetical protein MTR_7g104550 [Medicago truncatula]
           gi|355500830|gb|AES82033.1| hypothetical protein
           MTR_7g104550 [Medicago truncatula]
          Length = 344

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/68 (57%), Positives = 47/68 (69%)
 Frame = +3

Query: 147 IQKLEGHTGKVWSVAWNPVAGTDGTPAILASCSSDNTVRIWKQNPITSAFDCLATIRGAQ 326
           +QKLEGHT +VWS+ WNP  G  G P + ASCS D TVRIW+QN  T+ F C AT+    
Sbjct: 9   VQKLEGHTDRVWSLDWNPATGHAGIPLVFASCSGDKTVRIWEQNLSTNLFSCKATLEETH 68

Query: 327 TGTVRSCS 350
           T TVRSC+
Sbjct: 69  TRTVRSCA 76


>ref|XP_004149209.1| PREDICTED: probable cytosolic iron-sulfur protein assembly
           protein-like [Cucumis sativus]
           gi|449500925|ref|XP_004161232.1| PREDICTED: probable
           cytosolic iron-sulfur protein assembly protein-like
           [Cucumis sativus]
          Length = 350

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 37/68 (54%), Positives = 48/68 (70%)
 Frame = +3

Query: 147 IQKLEGHTGKVWSVAWNPVAGTDGTPAILASCSSDNTVRIWKQNPITSAFDCLATIRGAQ 326
           I KLEGHT +VWS+AWNP  G  G P + ASCS D TVRIW+Q+P + +++C A +    
Sbjct: 13  IAKLEGHTDRVWSLAWNPATGVGGIPLVFASCSGDKTVRIWEQSPSSGSWNCKAVLEETH 72

Query: 327 TGTVRSCS 350
           T TVRSC+
Sbjct: 73  TRTVRSCA 80


>ref|NP_001031421.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
           gi|330252697|gb|AEC07791.1| transducin/WD-40
           repeat-containing protein [Arabidopsis thaliana]
          Length = 337

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
 Frame = +3

Query: 147 IQKLEGHTGKVWSVAWNPVAG-TDGTPAILASCSSDNTVRIWKQNPITSAFDCLATIRGA 323
           IQKLEGHT +VWSVAWNPV+   DG   ILASCS DNTVRIW+Q+ ++ ++ C   +   
Sbjct: 13  IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72

Query: 324 QTGTVRSCS 350
            T TVRSC+
Sbjct: 73  HTRTVRSCA 81


>ref|NP_565615.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
           gi|20197268|gb|AAC31230.2| expressed protein
           [Arabidopsis thaliana] gi|20260510|gb|AAM13153.1|
           unknown protein [Arabidopsis thaliana]
           gi|21553416|gb|AAM62509.1| unknown [Arabidopsis
           thaliana] gi|28059424|gb|AAO30057.1| unknown protein
           [Arabidopsis thaliana] gi|330252696|gb|AEC07790.1|
           transducin/WD-40 repeat-containing protein [Arabidopsis
           thaliana]
          Length = 352

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
 Frame = +3

Query: 147 IQKLEGHTGKVWSVAWNPVAG-TDGTPAILASCSSDNTVRIWKQNPITSAFDCLATIRGA 323
           IQKLEGHT +VWSVAWNPV+   DG   ILASCS DNTVRIW+Q+ ++ ++ C   +   
Sbjct: 13  IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72

Query: 324 QTGTVRSCS 350
            T TVRSC+
Sbjct: 73  HTRTVRSCA 81


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