BLASTX nr result

ID: Cnidium21_contig00033468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033468
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527330.1| ATP-binding cassette transporter, putative [...   166   2e-39
ref|XP_002527329.1| ATP-binding cassette transporter, putative [...   164   9e-39
ref|XP_002529327.1| ATP-binding cassette transporter, putative [...   164   9e-39
ref|XP_002527332.1| ATP-binding cassette transporter, putative [...   162   2e-38
ref|XP_003625400.1| Pleiotropic drug resistance protein [Medicag...   157   8e-37

>ref|XP_002527330.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223533330|gb|EEF35082.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1437

 Score =  166 bits (419), Expect = 2e-39
 Identities = 81/129 (62%), Positives = 105/129 (81%)
 Frame = -3

Query: 390 ALKWASLEKLPTFDRLRKXXXXXXXXXXXSEIDIDNLGVNQRRDLLERLVKIADEDNEKF 211
           ALKWA+LEKLPT+DRLRK           SEIDIDNLG+ +++ L+ERLVK+A+EDNEKF
Sbjct: 40  ALKWAALEKLPTYDRLRKGILLSASQGVFSEIDIDNLGLQEKKTLIERLVKVAEEDNEKF 99

Query: 210 LLKLRDRIDRVGVQLATIEVKFENLHVEAEAFVGSRALPSFFNFNLSILEGLLNVFRILP 31
           LLKL++RIDRVG++L TIEV++E+L++EAEA  G RALPSF NF++SI+EGLLN   ILP
Sbjct: 100 LLKLKNRIDRVGIELPTIEVRYEHLNIEAEAVSGGRALPSFVNFSISIIEGLLNFLHILP 159

Query: 30  NNKKQYTIL 4
           +  + +TIL
Sbjct: 160 SRTRPFTIL 168


>ref|XP_002527329.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223533329|gb|EEF35081.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1434

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/129 (59%), Positives = 103/129 (79%)
 Frame = -3

Query: 390 ALKWASLEKLPTFDRLRKXXXXXXXXXXXSEIDIDNLGVNQRRDLLERLVKIADEDNEKF 211
           AL+WA+LEKLPT+DRLRK           +EID+DNLG  +R+ LLERLVK+A+EDNEKF
Sbjct: 40  ALRWAALEKLPTYDRLRKGILVSVSKGGANEIDVDNLGFEERKTLLERLVKVAEEDNEKF 99

Query: 210 LLKLRDRIDRVGVQLATIEVKFENLHVEAEAFVGSRALPSFFNFNLSILEGLLNVFRILP 31
           LLKL++R+DRVG+++ TIEV+FE L+VEA+AFVG+  LP+F NF++S +EG+LN   +LP
Sbjct: 100 LLKLKNRLDRVGIEIPTIEVRFERLNVEAQAFVGTSGLPTFANFSISAIEGILNALHVLP 159

Query: 30  NNKKQYTIL 4
           N K+  TIL
Sbjct: 160 NRKRPLTIL 168


>ref|XP_002529327.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223531198|gb|EEF33044.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1417

 Score =  164 bits (414), Expect = 9e-39
 Identities = 81/129 (62%), Positives = 106/129 (82%)
 Frame = -3

Query: 390 ALKWASLEKLPTFDRLRKXXXXXXXXXXXSEIDIDNLGVNQRRDLLERLVKIADEDNEKF 211
           ALKWA++EKLPT+DRLRK           +EID+ NLG+ +R++LLERLV++A+EDNEKF
Sbjct: 42  ALKWAAMEKLPTYDRLRKGILTPFTDGGANEIDVLNLGLQERKNLLERLVRVAEEDNEKF 101

Query: 210 LLKLRDRIDRVGVQLATIEVKFENLHVEAEAFVGSRALPSFFNFNLSILEGLLNVFRILP 31
           LLKLR+RIDRVG+ + TIEV+FE+L VEAEA+VGSRALP+FFN+++++LEGLLN F IL 
Sbjct: 102 LLKLRNRIDRVGIDIPTIEVRFEHLTVEAEAYVGSRALPTFFNYSVNMLEGLLNFFCILS 161

Query: 30  NNKKQYTIL 4
           + KK   IL
Sbjct: 162 SRKKHLHIL 170


>ref|XP_002527332.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223533332|gb|EEF35084.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1443

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/129 (60%), Positives = 105/129 (81%)
 Frame = -3

Query: 390 ALKWASLEKLPTFDRLRKXXXXXXXXXXXSEIDIDNLGVNQRRDLLERLVKIADEDNEKF 211
           ALKWA+LE+LPT+DRLRK           +EID+ +LG ++R+ LLERL+++ +EDNE+F
Sbjct: 43  ALKWAALERLPTYDRLRKGILFSASRNGANEIDVGSLGFHERKLLLERLLRVVEEDNEEF 102

Query: 210 LLKLRDRIDRVGVQLATIEVKFENLHVEAEAFVGSRALPSFFNFNLSILEGLLNVFRILP 31
           LLKL++RIDRVG++L TIEV+FENL++EAEAFVGSRALP+F NF++++ EG LN   ILP
Sbjct: 103 LLKLKNRIDRVGIELPTIEVRFENLNIEAEAFVGSRALPTFVNFSINLFEGFLNSLHILP 162

Query: 30  NNKKQYTIL 4
           + KKQ TIL
Sbjct: 163 SRKKQLTIL 171


>ref|XP_003625400.1| Pleiotropic drug resistance protein [Medicago truncatula]
           gi|355500415|gb|AES81618.1| Pleiotropic drug resistance
           protein [Medicago truncatula]
          Length = 1398

 Score =  157 bits (397), Expect = 8e-37
 Identities = 77/129 (59%), Positives = 103/129 (79%)
 Frame = -3

Query: 390 ALKWASLEKLPTFDRLRKXXXXXXXXXXXSEIDIDNLGVNQRRDLLERLVKIADEDNEKF 211
           ALKWA+++KLPTF+RLRK            EID++NLG+ +R+DLLERLV++A+EDNEKF
Sbjct: 36  ALKWAAIQKLPTFERLRKGLLTSLQGEAT-EIDVENLGLQERKDLLERLVRLAEEDNEKF 94

Query: 210 LLKLRDRIDRVGVQLATIEVKFENLHVEAEAFVGSRALPSFFNFNLSILEGLLNVFRILP 31
           LLKL+DRIDRVG+ L TIEV+FE L++EAEA VG+R+LP+F NF ++I+EGLLN   +LP
Sbjct: 95  LLKLKDRIDRVGIDLPTIEVRFEGLNIEAEAHVGNRSLPTFTNFMVNIVEGLLNSLHVLP 154

Query: 30  NNKKQYTIL 4
           + K+   IL
Sbjct: 155 SRKQHLNIL 163


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