BLASTX nr result

ID: Cnidium21_contig00033426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033426
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    65   1e-08
ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    55   8e-06
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    55   1e-05

>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
 Frame = +1

Query: 52   VHNMTRNKMTVCHPTCYGIPEDD-EYMTWLSHWKFGSHEMGPGDEVNISI---FNYYDDH 219
            ++N T+       PT Y +PEDD E M WLS+WKFG  E   GD+VN+S+   F YY   
Sbjct: 955  MNNETKGTNWSYSPTFYALPEDDDEDMLWLSYWKFGG-EFEVGDKVNVSVRMPFGYY--- 1010

Query: 220  SFEVKEIGVYLVYEEQEQTGVHLAERQKNSQYVIP 324
               VKE G+ +VYEE E+      + Q N+  +IP
Sbjct: 1011 ---VKECGIRIVYEENEK------DNQSNTADIIP 1036


>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/73 (41%), Positives = 47/73 (64%)
 Frame = +1

Query: 52  VHNMTRNKMTVCHPTCYGIPEDDEYMTWLSHWKFGSHEMGPGDEVNISIFNYYDDHSFEV 231
           + N T+      +P  YG+P+  E M WLSHW+FG+ ++  GD+VN+S     D   F+V
Sbjct: 345 ISNKTKVLKWSYNPIVYGVPQIGEDMLWLSHWRFGTDQLEVGDQVNVSASVTPD---FQV 401

Query: 232 KEIGVYLVYEEQE 270
           K+ GV+LVYE+++
Sbjct: 402 KKCGVHLVYEQED 414


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
 Frame = +1

Query: 70   NKMTVCH-----PTCYGIPEDDEYMTWLSHWKFGSHEMGPGDEVNISIFNYYDDHSFEVK 234
            N  T+C      PT YG+P+  E M WLSHW FG  ++  GDEV+I +          VK
Sbjct: 1045 NNKTICEKWTYSPTFYGMPKPLEEMLWLSHWTFGD-QLEVGDEVHILV---EMASGLTVK 1100

Query: 235  EIGVYLVYEEQEQTGVHLAERQKNSQY 315
            + G+ L+YEE E T   +AE   +S +
Sbjct: 1101 KCGIRLIYEE-ESTTQEIAESSSSSSW 1126


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +1

Query: 52   VHNMTRNKMTVCHPTCYGIPEDDEYMTWLSHWKFGSHEMGPGDEVNISIFNYYDDHSFEV 231
            + N T++      P  YGIPE ++ M WLSHWK      G GD++N+S         ++ 
Sbjct: 1032 IWNKTKDLKWTYSPIFYGIPEPEKSMLWLSHWKLEDLLEG-GDQLNVSAVM---STGYQA 1087

Query: 232  KEIGVYLVY-EEQEQTGVHLAERQKNSQY 315
            K I ++LVY +E E+T ++  E ++N+ +
Sbjct: 1088 KNIRIHLVYDQENEETELNSEETEENASF 1116


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