BLASTX nr result
ID: Cnidium21_contig00033425
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00033425
(557 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|2... 262 3e-68
ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi... 254 5e-66
ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago t... 253 2e-65
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,... 251 5e-65
ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containi... 243 1e-62
>ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|222846645|gb|EEE84192.1|
predicted protein [Populus trichocarpa]
Length = 814
Score = 262 bits (669), Expect = 3e-68
Identities = 125/174 (71%), Positives = 146/174 (83%)
Frame = +2
Query: 35 ERRLSCKPNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVTVGSALVDMYAKCGC 214
E+++ KPNSITLMT+LPGC KGKEIHAYAIRN L+ VTVGSALVDMYAKCGC
Sbjct: 427 EKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGC 486
Query: 215 LNLARRVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLI 394
LNLARRVFD M IRNVITWNV+IMAYGMHGKGK++LELF M +GA G EVKP EVT I
Sbjct: 487 LNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFI 546
Query: 395 AVFSSCSHSGMVDEGWNLFQRLKTDYGMEPTSDHYACVVDLLGRAGQLEEAYKL 556
A+F+SCSHSGMVDEG +LF ++K ++G+EP DHYAC+VDL+GRAG++EEAY L
Sbjct: 547 ALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGL 600
Score = 77.4 bits (189), Expect = 1e-12
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +2
Query: 53 KPNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVT-VGSALVDMYAKCGCLNLAR 229
KP+ +T ++LP C GKEIHAYA+R ++ + VGSALVDMY CG + R
Sbjct: 213 KPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGR 272
Query: 230 RVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKM 340
VFD + R + WN MI Y ++AL LF +M
Sbjct: 273 LVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEM 309
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Frame = +2
Query: 59 NSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVTVGSALVDMYAKCGCLNLARRVF 238
N+ T+ +I+P + + IH Y I+ L + + +AL+DMY++ G + ++R+F
Sbjct: 318 NATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIF 377
Query: 239 DGMSIRNVITWNVMIMAYGMHGKGKQALELFNKM-------ALKGAGGEE----VKPNEV 385
D M R++++WN +I +Y + G+ AL L ++M G +E KPN +
Sbjct: 378 DSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSI 437
Query: 386 TLIAVFSSCSHSGMVDEG 439
TL+ V C+ + +G
Sbjct: 438 TLMTVLPGCASLSALAKG 455
Score = 62.4 bits (150), Expect = 5e-08
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Frame = +2
Query: 53 KPNSITLMTILPGCXXXXXXXK---GKEIHAYAIRNALSLDVTVGSALVDMYAKCGCLNL 223
+P+S TL+++ C GK+IH R + +AL+ MYAK G L+
Sbjct: 110 EPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDD 168
Query: 224 ARRVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLIAVF 403
A+ + R+++TWN MI ++ + + +AL M L+G VKP+ VT +V
Sbjct: 169 AKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEG-----VKPDGVTFASVL 223
Query: 404 SSCSHSGMVDEGWNLF-QRLKTDYGMEPTSDHYACVVDLLGRAGQLE 541
+CSH ++ G + L+TD +E S + +VD+ GQ+E
Sbjct: 224 PACSHLDLLRTGKEIHAYALRTDDVIE-NSFVGSALVDMYCNCGQVE 269
Score = 61.2 bits (147), Expect = 1e-07
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Frame = +2
Query: 56 PNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSL--DVTVGSALVDMYAKCGCLNLAR 229
P++ +L GK+IHA+ + VT+ + LV+MY KCG L A
Sbjct: 8 PDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAY 67
Query: 230 RVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLIAVFSS 409
+VFD ++ R+ ++WN +I A + + A++ F M ++G +P+ TL+++ +
Sbjct: 68 KVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEG-----FEPSSFTLVSMALA 122
Query: 410 CSHSGMVDEGW 442
CS+ D W
Sbjct: 123 CSNLRKRDGLW 133
>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 254 bits (650), Expect = 5e-66
Identities = 121/168 (72%), Positives = 140/168 (83%)
Frame = +2
Query: 53 KPNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVTVGSALVDMYAKCGCLNLARR 232
KPN+ITLMT+LPGC KGKEIHAYAIRN L+ D+TVGSALVDMYAKCGCLNL+RR
Sbjct: 515 KPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRR 574
Query: 233 VFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLIAVFSSC 412
VF+ M +NVITWNV+IMA GMHGKG++ALELF M + G E KPNEVT I VF++C
Sbjct: 575 VFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAAC 634
Query: 413 SHSGMVDEGWNLFQRLKTDYGMEPTSDHYACVVDLLGRAGQLEEAYKL 556
SHSG++ EG NLF R+K D+G+EPTSDHYACVVDLLGRAGQLEEAY+L
Sbjct: 635 SHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYEL 682
Score = 85.1 bits (209), Expect = 7e-15
Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Frame = +2
Query: 59 NSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVT-VGSALVDMYAKCGCLNLARRV 235
+ +T+ ++LP C GKEIHAY +RN ++ + VGSALVDMY C + RRV
Sbjct: 296 DGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRV 355
Query: 236 FDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLIAVFSSCS 415
FD + R + WN MI Y +G ++AL LF +M +K AG + PN T+ +V +C
Sbjct: 356 FDHILGRRIELWNAMISGYARNGLDEKALILFIEM-IKVAG---LLPNTTTMASVMPACV 411
Query: 416 H 418
H
Sbjct: 412 H 412
Score = 79.7 bits (195), Expect = 3e-13
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Frame = +2
Query: 56 PNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVTVGSALVDMYAKCGCLNLARRV 235
PN+ T+ +++P C + IH YA++ D V +AL+DMY++ G ++++ +
Sbjct: 398 PNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETI 457
Query: 236 FDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMAL------------KGAGGEEVKPN 379
FD M +R+ ++WN MI Y + G+ AL L ++M G KPN
Sbjct: 458 FDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPN 517
Query: 380 EVTLIAVFSSCSHSGMVDEG 439
+TL+ V C+ + +G
Sbjct: 518 AITLMTVLPGCAALAAIAKG 537
Score = 68.2 bits (165), Expect = 8e-10
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Frame = +2
Query: 20 LDDFVERRLS-CKPNSITLMTILPGCXXXXXXXKGKEIHAYAIRNAL-SLDVTVGSALVD 193
+ ++E +S +P++ +L G++IHA A++ S VTV + LV+
Sbjct: 77 ISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVN 136
Query: 194 MYAKCGCLNLARRVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVK 373
MY KCG + +VFD ++ R+ ++WN I A K +QALE F M + E ++
Sbjct: 137 MYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQM-----ENME 191
Query: 374 PNEVTLIAVFSSCSHSGMV 430
+ TL++V +CS+ G++
Sbjct: 192 LSSFTLVSVALACSNLGVM 210
Score = 63.5 bits (153), Expect = 2e-08
Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
Frame = +2
Query: 59 NSITLMTILPGCXXXXXXXK---GKEIHAYAIRNALSLDVTVGSALVDMYAKCGCLNLAR 229
+S TL+++ C GK++H Y++R T +AL+ MYAK G ++ ++
Sbjct: 193 SSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFT-NNALMAMYAKLGRVDDSK 251
Query: 230 RVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLIAVFSS 409
+F+ R++++WN MI ++ + +AL F M L+G V+ + VT+ +V +
Sbjct: 252 ALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEG-----VELDGVTIASVLPA 306
Query: 410 CSHSGMVDEGWNLFQRLKTDYGMEPTSDHYACVVDLLGRAGQLEEAYKL 556
CSH +D G + + + + S + +VD+ Q+E ++
Sbjct: 307 CSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRV 355
>ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 874
Score = 253 bits (645), Expect = 2e-65
Identities = 119/179 (66%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Frame = +2
Query: 23 DDFVERR-LSCKPNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVTVGSALVDMY 199
DD+ + + KPNS+TLMT+LPGC KGKEIHAYA++ LS DV VGSALVDMY
Sbjct: 495 DDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMY 554
Query: 200 AKCGCLNLARRVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPN 379
AKCGCLNL+R VF+ MS+RNVITWNV+IMAYGMHGKG++AL+LF +M +G E++PN
Sbjct: 555 AKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPN 614
Query: 380 EVTLIAVFSSCSHSGMVDEGWNLFQRLKTDYGMEPTSDHYACVVDLLGRAGQLEEAYKL 556
EVT IA+F+S SHSGMVDEG NLF +K +G+EPTSDHYAC+VDLLGR+GQ+EEAY L
Sbjct: 615 EVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNL 673
Score = 85.5 bits (210), Expect = 5e-15
Identities = 58/168 (34%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Frame = +2
Query: 53 KPNSITLMTILPGCXXXXXXXKGKEIHAYAI-RNALSLDVTVGSALVDMYAKCGCLNLAR 229
+PN +TL ++LP C GKEIHA+ + N L + VG ALVDMY C R
Sbjct: 284 RPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGR 343
Query: 230 RVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLIAVFSS 409
VFDGM R + WN MI Y + +A+ELF +M + + PN VTL +V +
Sbjct: 344 LVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELG----LSPNSVTLSSVLPA 399
Query: 410 C--SHSGMVDEGWNLFQRLKTDYGMEPTSDHYACVVDLLGRAGQLEEA 547
C S + EG +G E ++D+ R G++E A
Sbjct: 400 CVRCESFLDKEG---IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIA 444
Score = 78.2 bits (191), Expect = 8e-13
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
Frame = +2
Query: 29 FVER--RLSCKPNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVTVGSALVDMYA 202
FVE L PNS+TL ++LP C + IH+ ++ D V +AL+DMY+
Sbjct: 377 FVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYS 436
Query: 203 KCGCLNLARRVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEV---- 370
+ G + +AR +F M+ +++++WN MI Y + G+ AL L + M +G +
Sbjct: 437 RMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQ-RGQAEHRINTFD 495
Query: 371 ----------KPNEVTLIAVFSSCSHSGMVDEG 439
KPN VTL+ V C+ + +G
Sbjct: 496 DYEDNKNFPLKPNSVTLMTVLPGCAALAALGKG 528
Score = 71.2 bits (173), Expect = 1e-10
Identities = 40/121 (33%), Positives = 65/121 (53%)
Frame = +2
Query: 56 PNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVTVGSALVDMYAKCGCLNLARRV 235
P++ +L GK++HA+ + +L V ++LV+MY KCG ++ ARRV
Sbjct: 83 PDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRV 142
Query: 236 FDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLIAVFSSCS 415
FD ++ R+ ++WN MI A + + A+ LF M L E V P TL++V +CS
Sbjct: 143 FDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLL-----ENVGPTSFTLVSVAHACS 197
Query: 416 H 418
+
Sbjct: 198 N 198
Score = 67.4 bits (163), Expect = 1e-09
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Frame = +2
Query: 56 PNSITLMTILPGCXXXXXXXK-GKEIHAYAIRNALSLDVTVGSALVDMYAKCGCLNLARR 232
P S TL+++ C GK++HA+ +RN T +ALV MYAK G + A+
Sbjct: 184 PTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFT-NNALVTMYAKLGRVYEAKT 242
Query: 233 VFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLIAVFSSC 412
+FD +++++WN +I + + + ++AL + M G V+PN VTL +V +C
Sbjct: 243 LFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSG-----VRPNGVTLASVLPAC 297
Query: 413 SHSGMVDEG 439
SH M+ G
Sbjct: 298 SHLEMLGCG 306
>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 679
Score = 251 bits (641), Expect = 5e-65
Identities = 118/172 (68%), Positives = 141/172 (81%)
Frame = +2
Query: 35 ERRLSCKPNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVTVGSALVDMYAKCGC 214
+++ KPNSITLMT+LPGC KGKEIHAYA+RNAL+ +VTVGSALVDMYAKCGC
Sbjct: 490 DKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGC 549
Query: 215 LNLARRVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLI 394
LNL+RRVFD M I+NVITWNV++MAYGMHG G++ALELF M KG EVKP EVT+I
Sbjct: 550 LNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMI 609
Query: 395 AVFSSCSHSGMVDEGWNLFQRLKTDYGMEPTSDHYACVVDLLGRAGQLEEAY 550
A+ ++CSHSGMVDEG LF R+K D+G+EP DHYACV DLLGRAG++E+AY
Sbjct: 610 AILAACSHSGMVDEGLKLFHRMKDDHGIEPGPDHYACVADLLGRAGKVEQAY 661
Score = 85.5 bits (210), Expect = 5e-15
Identities = 49/118 (41%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Frame = +2
Query: 53 KPNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVT-VGSALVDMYAKCGCLNLAR 229
KP+ +TL ++LP C GKEIHAYA+R+ ++ + VGSALVDMY CG + R
Sbjct: 279 KPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGR 338
Query: 230 RVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKM-ALKGAGGEEVKPNEVTLIAV 400
RVFDG+ R WN MI Y + ++AL LF +M A+ G + PN T+ ++
Sbjct: 339 RVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAG-----LCPNTTTMASI 391
Score = 75.9 bits (185), Expect = 4e-12
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Frame = +2
Query: 56 PNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVTVGSALVDMYAKCGCLNLARRV 235
PN+ T+ +I+P + IH Y I+ L D V +AL+DMY++ + +++ +
Sbjct: 383 PNTTTMASIVPASARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTI 442
Query: 236 FDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAG-----GEE---VKPNEVTL 391
FD M +R++++WN MI Y + G AL + ++M G G++ KPN +TL
Sbjct: 443 FDSMEVRDIVSWNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITL 502
Query: 392 IAVFSSCSHSGMVDEG 439
+ V C+ + +G
Sbjct: 503 MTVLPGCASLAALAKG 518
Score = 67.0 bits (162), Expect = 2e-09
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Frame = +2
Query: 53 KPNSITLMTILPGCXXXXXXXK---GKEIHAYAIRNALSLDVTVGSALVDMYAKCGCLNL 223
+P+S TL++ + C GK+IH Y RN T +AL+ MYA G L+
Sbjct: 176 EPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWSTFT-NNALMTMYANLGRLDD 234
Query: 224 ARRVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLIAVF 403
A+ +F RN+I+WN MI ++ + + +AL M L+G VKP+ VTL +V
Sbjct: 235 AKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEG-----VKPDGVTLASVL 289
Query: 404 SSCSHSGMVDEGWNLFQRLKTDYGMEPTSDHYACVVDLLGRAGQL 538
+CS+ M+ G + + S + +VD+ GQ+
Sbjct: 290 PACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQV 334
Score = 61.6 bits (148), Expect = 8e-08
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Frame = +2
Query: 20 LDDFVERRLS-CKPNSITLMTILPGCXXXXXXXKGKEIHAYAIRNAL-SLDVTVGSALVD 193
+ +V+ LS P+S +L GK+IHA+ ++ S V + ++LV+
Sbjct: 62 ISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYESSSVAIANSLVN 121
Query: 194 MYAKCGCLNLARRVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVK 373
Y KC L+ +VFD ++ R++++WN +I A+ + + ALE F M E+++
Sbjct: 122 FYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFML-----AEDLE 176
Query: 374 PNEVTLIAVFSSCSH 418
P+ TL++ +CS+
Sbjct: 177 PSSFTLVSPVIACSN 191
>ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 243 bits (621), Expect = 1e-62
Identities = 115/169 (68%), Positives = 138/169 (81%), Gaps = 1/169 (0%)
Frame = +2
Query: 53 KPNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVTVGSALVDMYAKCGCLNLARR 232
KPNS+TLMT+LPGC KGKEIHAYA++ L++DV VGSALVDMYAKCGCLNLA R
Sbjct: 753 KPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASR 812
Query: 233 VFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEV-KPNEVTLIAVFSS 409
VFD M IRNVITWNV+IMAYGMHGKG++ALELF M G EV +PNEVT IA+F++
Sbjct: 813 VFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAA 872
Query: 410 CSHSGMVDEGWNLFQRLKTDYGMEPTSDHYACVVDLLGRAGQLEEAYKL 556
CSHSGMVDEG +LF +K +G+EP DHYAC+VDLLGR+G+++EAY+L
Sbjct: 873 CSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYEL 921
Score = 80.9 bits (198), Expect = 1e-13
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Frame = +2
Query: 53 KPNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVT-VGSALVDMYAKCGCLNLAR 229
+P+ +TL ++LP C G+EIH YA+RN ++ + VG+ALVDMY C R
Sbjct: 531 RPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGR 590
Query: 230 RVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLIAVFSS 409
VFDG+ R V WN ++ Y + QAL LF +M + E PN T +V +
Sbjct: 591 LVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISE----SEFCPNATTFASVLPA 646
Query: 410 CSHSGMVDEGWNLFQRL-KTDYGMEPTSDHYACVVDLLGRAGQLE 541
C + + + + K +G + + ++D+ R G++E
Sbjct: 647 CVRCKVFSDKEGIHGYIVKRGFGKDKYVQN--ALMDMYSRMGRVE 689
Score = 75.9 bits (185), Expect = 4e-12
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Frame = +2
Query: 56 PNSITLMTILPGCXXXXXXXKGKEIHAYAIRNALSLDVTVGSALVDMYAKCGCLNLARRV 235
PN+ T ++LP C + IH Y ++ D V +AL+DMY++ G + +++ +
Sbjct: 635 PNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTI 694
Query: 236 FDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGA-------------GGEEVKP 376
F M+ R++++WN MI + G+ AL L ++M + GG KP
Sbjct: 695 FGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKP 754
Query: 377 NEVTLIAVFSSCSHSGMVDEG-----WNLFQRLKTDYGMEPTSDHYACVVDLLGRAGQLE 541
N VTL+ V C+ + +G + + Q+L D + + +VD+ + G L
Sbjct: 755 NSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVG------SALVDMYAKCGCLN 808
Query: 542 EAYKL 556
A ++
Sbjct: 809 LASRV 813
Score = 68.9 bits (167), Expect = 5e-10
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Frame = +2
Query: 56 PNSITLMTILPGCXXXXXXXKGKEIHAYAIR--NALSLDVTVGSALVDMYAKCGCLNLAR 229
P++ +L GK+IHA+ + +A V V ++LV+MY KCG L AR
Sbjct: 328 PDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAAR 387
Query: 230 RVFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLIAVFSS 409
+VFD + R+ ++WN MI + + +L LF M E V P TL++V +
Sbjct: 388 QVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLML-----SENVDPTSFTLVSVAHA 442
Query: 410 CSH 418
CSH
Sbjct: 443 CSH 445
Score = 64.7 bits (156), Expect = 9e-09
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = +2
Query: 56 PNSITLMTILPGCXXXXXXXK-GKEIHAYAIRNALSLDVTVGSALVDMYAKCGCLNLARR 232
P S TL+++ C + GK++HAY +RN L +ALV MYA+ G +N A+
Sbjct: 431 PTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKA 489
Query: 233 VFDGMSIRNVITWNVMIMAYGMHGKGKQALELFNKMALKGAGGEEVKPNEVTLIAVFSSC 412
+F +++++WN +I + + + ++AL M + G V+P+ VTL +V +C
Sbjct: 490 LFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDG-----VRPDGVTLASVLPAC 544
Query: 413 S 415
S
Sbjct: 545 S 545