BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033411
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    74   9e-12
gb|AAR15468.1| F-box protein [Capsella rubella]                        66   3e-09
gb|AAR15451.1| F-box protein [Arabidopsis arenosa]                     64   1e-08
gb|AAR15502.1| F-box protein [Arabidopsis arenosa]                     64   2e-08
ref|XP_002871279.1| F box protein family [Arabidopsis lyrata sub...    64   2e-08

>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
 Frame = +3

Query: 60  FVSLDDPNTPSPYRTLTFAHDPFDPQRIRILRSCNGLLLCCTYYLARFEQRNTYVYNPST 239
           FV LD   T +P+ +LTF   P   + I IL+SCNGL  CC+       +R  Y+YNP+T
Sbjct: 72  FVPLDPLQTSAPFTSLTFVDHP---RGIEILQSCNGLF-CCSSVDYNDSERKYYIYNPTT 127

Query: 240 NQLDTLPP----AIRVNHFVGLAFDPSKSPHYKVI 332
            Q  TLPP    ++R    V LAFDPSKS  YKV+
Sbjct: 128 KQFTTLPPLCGRSVRRVLGVNLAFDPSKSHTYKVV 162


>gb|AAR15468.1| F-box protein [Capsella rubella]
          Length = 417

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
 Frame = +3

Query: 147 ILRSCNGLLLC-CTYYLARFEQRNTYVYNPSTNQLDTLPPAIRVNHFVGLAFDPSKSPHY 323
           I++S NGLLLC C    +   + N YVYNP+T Q   LPP       + LAFDPS SPHY
Sbjct: 128 IMQSTNGLLLCRCACASSNQFKTNYYVYNPTTKQYTLLPPVTTGYITLSLAFDPSTSPHY 187

Query: 324 KVIAFVTKS--DFIGDFHIYS 380
           KV  F T+S   F     +YS
Sbjct: 188 KVFCFRTRSMTSFSFSIEVYS 208


>gb|AAR15451.1| F-box protein [Arabidopsis arenosa]
          Length = 421

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 45/104 (43%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
 Frame = +3

Query: 60  FVSLDDPNTPSPYRT-----LTFAHDPFDPQRIRILRSCNGLLLC-CTYYLARFEQRNTY 221
           FVSLDD +  +  R      L F     D   + I++S NGLLLC C+   +     N Y
Sbjct: 97  FVSLDDEDDATNQRVSSSLPLWFTDHQTD---MIIMQSTNGLLLCKCSCASSNHFNTNYY 153

Query: 222 VYNPSTNQLDTLPPAIRVNHFVGLAFDPSKSPHYKVIAFVTKSD 353
           VYNP+T Q  TL P I  +  + LAFDPSKSPHYKV     +S+
Sbjct: 154 VYNPTTKQY-TLLPQITGHIALSLAFDPSKSPHYKVFCLRGRSN 196


>gb|AAR15502.1| F-box protein [Arabidopsis arenosa]
          Length = 421

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 45/104 (43%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
 Frame = +3

Query: 60  FVSLDDPNTPSPYRT-----LTFAHDPFDPQRIRILRSCNGLLLC-CTYYLARFEQRNTY 221
           FVSLDD +  +  R      L F     D   + I++S NGLLLC C+   +     N Y
Sbjct: 97  FVSLDDEDDATNQRISSSLPLWFTDHQSD---MIIMQSTNGLLLCKCSCASSNHFNTNYY 153

Query: 222 VYNPSTNQLDTLPPAIRVNHFVGLAFDPSKSPHYKVIAFVTKSD 353
           VYNP+T Q  TL P I  +  + LAFDPSKSPHYKV     +S+
Sbjct: 154 VYNPTTKQY-TLLPQITGHIALSLAFDPSKSPHYKVFCLRGRSN 196


>ref|XP_002871279.1| F box protein family [Arabidopsis lyrata subsp. lyrata]
           gi|34013883|gb|AAQ56109.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317116|gb|EFH47538.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 45/104 (43%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
 Frame = +3

Query: 60  FVSLDDPNTPSPYRT-----LTFAHDPFDPQRIRILRSCNGLLLC-CTYYLARFEQRNTY 221
           FVSLDD +  +  R      L F     D   + I++S NGLLLC C+   +     N Y
Sbjct: 97  FVSLDDEDDATNQRISSSLPLWFTDHQTD---MIIMQSTNGLLLCQCSCASSNHFNTNYY 153

Query: 222 VYNPSTNQLDTLPPAIRVNHFVGLAFDPSKSPHYKVIAFVTKSD 353
           VYNP+T Q  TL P I  +  + LAFDPSKSPHYKV     +S+
Sbjct: 154 VYNPTTKQY-TLLPQITGHIALSLAFDPSKSPHYKVFCLRGRSN 196