BLASTX nr result

ID: Cnidium21_contig00033405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033405
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253...    81   8e-14
emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]    80   2e-13
ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinu...    77   1e-12
ref|XP_002305904.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
emb|CBI27342.3| unnamed protein product [Vitis vinifera]               76   3e-12

>ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
          Length = 1023

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/113 (38%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
 Frame = +3

Query: 6   GFTRKKHNCYNCGLLFCRACXXXXXXXXXXXXXXXRPSRVCDQCFNRLQRTANPN---KL 176
           GFTRKKHNCYNCGLLFCRAC               +P RVCD C+  LQR  + +   KL
Sbjct: 611 GFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNKKKPFRVCDPCYTYLQRIKHSSRLLKL 670

Query: 177 ETISPQPVLVKQKGFLTERSNTEDVIAPSKTFHSNDSQCGDIKTIKDKGEFEH 335
           E  SP+ +L+ QK    E+ +  +       F S    C +     +K  F++
Sbjct: 671 ENHSPRQLLMTQKTSFDEKEDRGEGTPARTQFSSVGQPCNEASQSYEKKPFKN 723


>emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
 Frame = +3

Query: 6    GFTRKKHNCYNCGLLFCRACXXXXXXXXXXXXXXXRPSRVCDQCFNRLQRTANPN---KL 176
            GFTRKKHNCYNCGLLFCRAC               +P RVCD C+  LQR  + +   KL
Sbjct: 670  GFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNKKKPFRVCDPCYTYLQRIKHSSRLLKL 729

Query: 177  ETISPQPVLVKQKGFLTERSNTEDVIAPSKTFHSNDSQCGDIKTIKDKGEFEH 335
            E  +P+ +L+ QK    E+ +  +       F S    C +     +K  F++
Sbjct: 730  ENHNPRQLLMTQKTSFDEKEDRGEGTPARTQFSSVGQPCNEASQSYEKKPFKN 782


>ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
            gi|223534074|gb|EEF35792.1| Ran GTPase binding protein,
            putative [Ricinus communis]
          Length = 1086

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/119 (34%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
 Frame = +3

Query: 6    GFTRKKHNCYNCGLLFCRACXXXXXXXXXXXXXXXRPSRVCDQCFNRLQRTANPNKL--- 176
            G TRKKHNCYNCGLLFC +C               +PSRVCD C N LQ+     ++   
Sbjct: 673  GLTRKKHNCYNCGLLFCHSCSSKKVINASLAPNKSKPSRVCDSCLNHLQKVTLSGRMSKP 732

Query: 177  ------ETISPQPVLVKQKGFLTERSNTEDVIAPSKTFHSNDSQCGDIKTIKDKGEFEH 335
                  + + P  VL  +K    E +            ++ DS     KT KD+GE +H
Sbjct: 733  GTHGSKQLLCPNKVLANEKEGKGEATPPGSHTRSVSQSYNQDSPVSQRKTQKDQGEHQH 791


>ref|XP_002305904.1| predicted protein [Populus trichocarpa] gi|222848868|gb|EEE86415.1|
           predicted protein [Populus trichocarpa]
          Length = 1078

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/112 (38%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
 Frame = +3

Query: 6   GFTRKKHNCYNCGLLFCRACXXXXXXXXXXXXXXXRPSRVCDQCFNRLQRTANPNKLETI 185
           GFTRKKHNCYNCGLLFCRAC               +  RVCD CFN LQ   +P      
Sbjct: 668 GFTRKKHNCYNCGLLFCRACSSKKLINASLAPNKSKLCRVCDSCFNSLQNITHPGG---- 723

Query: 186 SPQPVLVKQKGFLTERSNTEDVIAPSKTFH-----SNDSQCGDIKTIKDKGE 326
             + +L +QK    E+        P          S +SQ G+ KT +++GE
Sbjct: 724 GSRKLLSQQKALSDEKEERGGATPPGHRLQLMSRPSLESQPGERKTSRNQGE 775


>emb|CBI27342.3| unnamed protein product [Vitis vinifera]
          Length = 925

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
 Frame = +3

Query: 6   GFTRKKHNCYNCGLLFCRACXXXXXXXXXXXXXXXRPSRVCDQCFNRLQRTANPN---KL 176
           GFTRKKHNCYNCGLLFCRAC               +P RVCD C+  LQR  + +   KL
Sbjct: 559 GFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNKKKPFRVCDPCYTYLQRIKHSSRLLKL 618

Query: 177 ETISPQPVLVKQK 215
           E  SP+ +L+ QK
Sbjct: 619 ENHSPRQLLMTQK 631


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