BLASTX nr result

ID: Cnidium21_contig00033357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033357
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containi...    75   6e-12
ref|XP_003530996.1| PREDICTED: pentatricopeptide repeat-containi...    69   3e-10
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]    69   4e-10

>ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Cucumis sativus]
          Length = 398

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/72 (50%), Positives = 48/72 (66%)
 Frame = -3

Query: 373 TYEIMLPFVCDMANFDYAFQLCKDVLNSRHRVSVSVIQRVVDGLAKDLKTEEAKVLVDLA 194
           TY  +LP +C+  +FD   QLCK+ +N R     + +QRVVDGLA+  KTEEAK LV+L 
Sbjct: 322 TYRTLLPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVELY 381

Query: 193 NANNYFHYKLKL 158
           N+ N   +KLKL
Sbjct: 382 NSKNNLKFKLKL 393


>ref|XP_003530996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Glycine max]
          Length = 381

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/75 (41%), Positives = 48/75 (64%)
 Frame = -3

Query: 373 TYEIMLPFVCDMANFDYAFQLCKDVLNSRHRVSVSVIQRVVDGLAKDLKTEEAKVLVDLA 194
           TY I++PF+C+  +F  A  +CK++ N+R RV  +++Q VVD LA +    EAK +V++ 
Sbjct: 306 TYSIIVPFLCEKGDFKTAIDMCKEIFNNRCRVDATLLQGVVDKLASEGMDTEAKEIVEIG 365

Query: 193 NANNYFHYKLKLEAE 149
             N Y  Y+L L AE
Sbjct: 366 KTNRYCRYRLDLPAE 380


>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = -3

Query: 376 VTYEIMLPFVCDMANFDYAFQLCKDVLNSRHRVSVSVIQRVVDGLAKDLKTEEAKVLVDL 197
           +T+  ++P  C+  +FD AF+LCK++ N +  V   ++Q  VDGL K  K  EAK LV L
Sbjct: 307 LTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQL 366

Query: 196 ANANNYFHYKLKLEAE 149
            N+N+Y  Y LK+  +
Sbjct: 367 GNSNSYRRYNLKIPTD 382


>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = -3

Query: 376 VTYEIMLPFVCDMANFDYAFQLCKDVLNSRHRVSVSVIQRVVDGLAKDLKTEEAKVLVDL 197
           +T+  ++P  C+  +FD AF+LCK++ N +  V   ++Q  VDGL K  K  EAK LV L
Sbjct: 306 LTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQL 365

Query: 196 ANANNYFHYKLKLEAE 149
            N+N+Y  Y LK+  +
Sbjct: 366 GNSNSYRRYNLKIPTD 381


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = -3

Query: 376 VTYEIMLPFVCDMANFDYAFQLCKDVLNSRHRVSVSVIQRVVDGLAKDLKTEEAKVLVDL 197
           +T+  ++P  C+  +FD AF+LCK++ N +  V   ++Q  VDGL K  K  EAK LV L
Sbjct: 307 LTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQL 366

Query: 196 ANANNYFHYKLKLEAE 149
            N+N+Y  Y LK+  +
Sbjct: 367 GNSNSYRRYNLKIPTD 382


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