BLASTX nr result

ID: Cnidium21_contig00033329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033329
         (990 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21835.3| unnamed protein product [Vitis vinifera]              290   4e-76
ref|XP_002522626.1| transcription initiation factor tfiid, putat...   251   2e-64
ref|XP_004149785.1| PREDICTED: transcription initiation factor T...   244   2e-62
ref|XP_003523903.1| PREDICTED: transcription initiation factor T...   241   2e-61
ref|XP_002309876.1| histone acetyltransferase [Populus trichocar...   235   1e-59

>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
          Length = 1798

 Score =  290 bits (742), Expect = 4e-76
 Identities = 163/319 (51%), Positives = 206/319 (64%), Gaps = 3/319 (0%)
 Frame = +2

Query: 41  MYGNVDGAGDLDIDYLDEEAKEHLGALADKLGSSLTDINLSVRSVHTSADATEQDYDEKA 220
           M+GNVDGAGDLD +Y+ ++AKEHL ALADKLG SLTDI+LSV+S  T AD  EQDYDEKA
Sbjct: 1   MFGNVDGAGDLDYNYVFQDAKEHLAALADKLGPSLTDIDLSVKSPQTPADGAEQDYDEKA 60

Query: 221 EDAVDYEDIEEQYEGPEVQAITEEDYLLPKKDYISTQVS-ASVKGVTSVF-XXXXXXXXX 394
           EDAV+YEDI+EQYEGPE+QA TEEDYLL KK+Y S  VS AS+    SVF          
Sbjct: 61  EDAVNYEDIDEQYEGPEIQAATEEDYLLSKKEYFSADVSVASLDHSASVFDDDNYDEDEE 120

Query: 395 XXXXXXXXXXXTEVQIAPSSGDGDNLVVLSQGEDSLPGDIVNGASETEEPTPYLEDFLKE 574
                      +EVQ   S   G++L V+S+GE S   D+  G  E E  T  LED  +E
Sbjct: 121 FEKEHEVVDNNSEVQAISSGEQGEHLSVVSEGEKSPDDDLFPGLLEPENLTGDLEDIPEE 180

Query: 575 EPDIPEEPVNNQNLTPLPILYTEEGSVILRFSEIFGIHXXXXXXEKRECRYSVPKDKYMS 754
           EP+  EEP   +   PLPIL  E+G VILRFSEIFGIH      EKR+ RY++PK++Y S
Sbjct: 181 EPEGLEEPFEGKRSAPLPILCVEDGMVILRFSEIFGIHGPLKKGEKRDRRYTIPKERYKS 240

Query: 755 MGAADVVEEDDETFLKGLCQGFTW-KCRTHVNDDNLPIKDSESDPETLKFVQHPGTVASE 931
           M A D VEED+E FLKG CQ F++ K +    DD     + E++ + +  VQ   T+  +
Sbjct: 241 MDAPDNVEEDEEAFLKGGCQAFSFTKHKLLTQDDASVFMEDEAELKKVGVVQGTATMELQ 300

Query: 932 VAQNRRDTCLSDEPMKEDI 988
             + R+ +C+S EPMKED+
Sbjct: 301 NDEQRKHSCISAEPMKEDM 319


>ref|XP_002522626.1| transcription initiation factor tfiid, putative [Ricinus communis]
           gi|223538102|gb|EEF39713.1| transcription initiation
           factor tfiid, putative [Ricinus communis]
          Length = 1885

 Score =  251 bits (641), Expect = 2e-64
 Identities = 151/330 (45%), Positives = 205/330 (62%), Gaps = 7/330 (2%)
 Frame = +2

Query: 20  GNSLLGFMYGNVDGAGDLDIDYLDEEAKEHLGALADKLGSSLTDINLSVRSVHTSADATE 199
           G+ LLGFM+GNVD +GDLD+DYLDE+AKEHL ALADKLGSSLTDI++ ++S   +ADA E
Sbjct: 28  GSRLLGFMFGNVDNSGDLDVDYLDEDAKEHLAALADKLGSSLTDIDV-LKSPQITADAAE 86

Query: 200 QDYDEKAEDAVDYEDIEEQYEGPEVQAITEEDYLLPKKDYISTQVSAS-VKGVTSVFXXX 376
           QDYDEKAE+AVDYED +EQYEGPE+QA +EEDYLLPKK+Y S++VS S +K  TSVF   
Sbjct: 87  QDYDEKAENAVDYEDFDEQYEGPEIQAASEEDYLLPKKEYFSSEVSLSTLKPTTSVF--- 143

Query: 377 XXXXXXXXXXXXXXXXXTEVQIAPSSGDGDNLVVLSQGEDSLPGDIVNGASETEEPTPYL 556
                             E +     G+G+      + E+    +      E E+    +
Sbjct: 144 ------------DDENYDEEEEEKGGGEGEE---EEEEEEEEEAEEEEEEKEAEKEHIAV 188

Query: 557 EDFLKEE----PDIPEEPVNNQNLTPLPILYTEEGSVILRFSEIFGIHXXXXXXEKRECR 724
           ++ L+++     D  EEP + ++  PLP+L  E+G VILRFSEIFGIH      EKR+ R
Sbjct: 189 DEKLEDQCISLSDAMEEPPDGKSSAPLPVLCVEDGLVILRFSEIFGIHEPLKKGEKRDRR 248

Query: 725 YSVPKDKYMSMGAADVVEEDDETFLKGLCQGFTWKCRTHVNDDNLPIKDSESDPETLKFV 904
           YS+ K++Y SM  +D VE+D+E FLKG  Q F  +  +HVN   +    ++   E+ KF 
Sbjct: 249 YSIFKERYKSMDVSDFVEDDEEAFLKGSSQVF--QLHSHVNQYEI-AASNDGGSESGKF- 304

Query: 905 QHPGTVASEVAQN--RRDTCLSDEPMKEDI 988
                V    AQN  +R +C+S EPM +D+
Sbjct: 305 ----GVMQRSAQNEEQRSSCVSGEPMNKDL 330


>ref|XP_004149785.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
           [Cucumis sativus]
          Length = 1984

 Score =  244 bits (623), Expect = 2e-62
 Identities = 138/323 (42%), Positives = 187/323 (57%), Gaps = 2/323 (0%)
 Frame = +2

Query: 20  GNSLLGFMYGNVDGAGDLDIDYLDEEAKEHLGALADKLGSSLTDINLSVRSVHTSADATE 199
           GN  LGFM+GNVD +GDLD DYLDE+AKEHL ALADKLG +LTDI+LS +S    +DA E
Sbjct: 26  GNRFLGFMFGNVDNSGDLDADYLDEDAKEHLDALADKLGPTLTDIDLSTKSSRIQSDAVE 85

Query: 200 QDYDEKAEDAVDYEDIEEQYEGPEVQAITEEDYLLPKKDYISTQVSASVKGVTSVFXXXX 379
            DYD KAEDAVDYEDI+E+Y+GPE++A  EED+LLP+++Y S +VS S    T+      
Sbjct: 86  PDYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPRREYFSAEVSLSTLEPTASVFDDE 145

Query: 380 XXXXXXXXXXXXXXXXTEVQIAPSSGD-GDNLVVLSQGEDSLPGDIVNGASETEEPTPYL 556
                            E QI  +S + G+ L ++S+GE SL   + +     E  T   
Sbjct: 146 DYDEDFENVPDVVNNSVEPQIIHASDEQGECLEIVSEGEKSLA--VESAPLNNEVITGRA 203

Query: 557 EDFLKEEPDIPEEPVNNQNLTPLPILYTEEGSVILRFSEIFGIHXXXXXXEKRECRYSVP 736
           E   +  P++ +   ++++ TPLP+L  E G  IL+FSEIFG+H      EKR  RY   
Sbjct: 204 ESLHEGTPEVQKRLQDDKSHTPLPVLCMENGMAILQFSEIFGVHDSLKKKEKRASRYYTR 263

Query: 737 KDKYMSMGAADVVEEDDETFLKGLCQGFTW-KCRTHVNDDNLPIKDSESDPETLKFVQHP 913
           KDKY S   +D+VEED+E FL G  +G ++ K    V DD       + +      VQ  
Sbjct: 264 KDKYRSADVSDIVEEDEEAFLHGFSRGVSYVKPAYDVKDDTTMFDVDDLEYNKFGVVQGV 323

Query: 914 GTVASEVAQNRRDTCLSDEPMKE 982
             + S V   ++D C   EPMK+
Sbjct: 324 DVMTSRVDWQQKDHCCGAEPMKQ 346


>ref|XP_003523903.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
           [Glycine max]
          Length = 1919

 Score =  241 bits (615), Expect = 2e-61
 Identities = 140/327 (42%), Positives = 189/327 (57%), Gaps = 2/327 (0%)
 Frame = +2

Query: 11  SDLGNSLLGFMYGNVDGAGDLDIDYLDEEAKEHLGALADKLGSSLTDINLSVRSVHTSAD 190
           S  GN  LGFM+GNVD +GDLD+DYLDE+AKEHL ALADKLG SLTDI+LS +S  T  D
Sbjct: 24  SGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPQTPPD 83

Query: 191 ATEQDYDEKAEDAVDYEDIEEQYEGPEVQAITEEDYLLPKKDYISTQVSASVKGVTSVFX 370
             EQ  D KAEDAVDYEDI+E+Y+GPE +A  EEDYLLPKK++ S + S  ++   SVF 
Sbjct: 84  VVEQGCDVKAEDAVDYEDIDEEYDGPETEAANEEDYLLPKKEFFSAEASVCLESKASVFD 143

Query: 371 XXXXXXXXXXXXXXXXXXXTEVQIAPSSGDGDNLVVLSQGEDSLPGDIVNGASETEEPTP 550
                                  I  +    ++ V  S+ E SL  ++   + +TEE   
Sbjct: 144 DENYDEDSEKEQDFVNDDCKVDNIPLAGEQKESFVDASKEESSLEHELHVDSPQTEELDA 203

Query: 551 YLEDFLKEEPDIPEEPVNNQNLTPLPILYTEEGSVILRFSEIFGIHXXXXXXEKRECRYS 730
            ++   +E P++P+  +      PLP+L  E+G  ILRFSEIFGIH      EKRE R+S
Sbjct: 204 DVQKLEEESPEVPKRSM----AMPLPVLCVEDGVTILRFSEIFGIHEPLRKGEKREHRHS 259

Query: 731 VPKDKYMSMGAA-DVVEEDDETFLKGLCQGFT-WKCRTHVNDDNLPIKDSESDPETLKFV 904
           +P+D+Y S+    D +EED+E FLKG  Q  +  K    V++D     D + +     F+
Sbjct: 260 IPRDRYKSLDLIDDFIEEDEEEFLKGFSQSLSLTKQVCVVHNDVSESNDVDLEFPKFGFL 319

Query: 905 QHPGTVASEVAQNRRDTCLSDEPMKED 985
               +VA +     +D+C S EPMK D
Sbjct: 320 LADASVARKDDHQSKDSCHSAEPMKGD 346


>ref|XP_002309876.1| histone acetyltransferase [Populus trichocarpa]
           gi|222852779|gb|EEE90326.1| histone acetyltransferase
           [Populus trichocarpa]
          Length = 1851

 Score =  235 bits (599), Expect = 1e-59
 Identities = 145/318 (45%), Positives = 190/318 (59%), Gaps = 2/318 (0%)
 Frame = +2

Query: 41  MYGNVDGAGDLDIDYLDEEAKEHLGALADKLGSSLTDINLSVRSVHTSADATEQDYDEKA 220
           M+GNVD +GDLD DYLDE+AKEHL ALADKLGSSLT+I+LSV+S  TS DA EQDYD KA
Sbjct: 1   MFGNVDNSGDLDADYLDEDAKEHLAALADKLGSSLTEIDLSVKSPQTSTDAAEQDYDAKA 60

Query: 221 EDAVDYEDIEEQYEGPEVQAITEEDYLLPKKDYISTQVSASVKGVTSVFXXXXXXXXXXX 400
           EDAVDYED +EQYEGPE+QA++EEDYLL KKDY+ ++ S     ++              
Sbjct: 61  EDAVDYEDFDEQYEGPEIQAVSEEDYLLSKKDYMLSE-STLQPPISDDEDYDEGVKEELE 119

Query: 401 XXXXXXXXXTEVQIAPSSGDGDNLVVLSQGEDSLPGDIVNGASETEEPTPYLEDFLKEEP 580
                     EVQ A  SG  D  VV         G++V+   E+ +      D  +EE 
Sbjct: 120 KEPVVSDKKLEVQTASLSGQQDVGVV--------SGELVSVGFESSDVE--FVDIHEEET 169

Query: 581 DIPEEPVNNQNLTPLPILYTEEGSVILRFSEIFGIHXXXXXXEKRECRYSVPKDKYMSMG 760
           D  +  ++  + TPLPIL  E+G  ILRFSEIF IH      EKR+ RYS+ K+KY SM 
Sbjct: 170 DTVKGSLDKGH-TPLPILCIEDGMEILRFSEIFSIHEPLKKGEKRDHRYSILKEKYTSMD 228

Query: 761 AADVVEEDDETFLKGLCQGFTWKCRTHVNDDNLPIKDSESDPETLKFVQHPGTV--ASEV 934
            +D+VEED+E FLK    G       HVN  ++ I  SE   E  +F    G +  + ++
Sbjct: 229 VSDIVEEDEEAFLKD--SGQMLPSHLHVNQHDISI-FSEDASELARFGSMHGAIQMSVQI 285

Query: 935 AQNRRDTCLSDEPMKEDI 988
            + RR++ LS EP+ +D+
Sbjct: 286 EEQRRNSYLSAEPLNKDV 303


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