BLASTX nr result

ID: Cnidium21_contig00033294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033294
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]    55   6e-06

>gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]
          Length = 386

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/109 (30%), Positives = 51/109 (46%)
 Frame = +2

Query: 65  QDLYMWNPCLKKYKCIVSSSFRKRYTNQVRISYALGFGFYEPSEDYRVVRIMYFSDYRGN 244
           ++ Y+WNP + K     S    K  +N    S   GFG+ E  +DY+VV I Y   Y  +
Sbjct: 125 KEAYIWNPTITK-----SKELPKFTSNMCSSSIKYGFGYDESRDDYKVVFIHY--PYNHS 177

Query: 245 PCGKLTPRVEVFSLRMNKWRPWKGVKSIIIPRVVSEIGTTVNSTVYWVN 391
               +T  V ++SLR N W  ++      +   V+  G  VN  +YW +
Sbjct: 178 SSSNMTTVVHIYSLRNNSWTTFRDQLQCFL---VNHYGRFVNGKLYWTS 223


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