BLASTX nr result

ID: Cnidium21_contig00033293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033293
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_003588560.1| DNA polymerase I family protein expressed [M...   118   6e-25
ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin...   116   2e-24
emb|CBI20904.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_004168093.1| PREDICTED: DNA polymerase theta-like, partia...   112   4e-23

>ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|222866256|gb|EEF03387.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/70 (78%), Positives = 66/70 (94%)
 Frame = -1

Query: 211 TLAKLLNSTLGAICSLSRLSMRTQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHTVDFKM 32
           TLAKLLNSTLG+ICSL+RLSM TQ+YTLHGHWLQTSTATGRLS+EEPNLQCVEH VDF+M
Sbjct: 295 TLAKLLNSTLGSICSLARLSMETQKYTLHGHWLQTSTATGRLSIEEPNLQCVEHAVDFEM 354

Query: 31  SANEKGEGTD 2
           S++++G+  +
Sbjct: 355 SSDKEGDDAE 364


>ref|XP_003588560.1| DNA polymerase I family protein expressed [Medicago truncatula]
            gi|355477608|gb|AES58811.1| DNA polymerase I family
            protein expressed [Medicago truncatula]
          Length = 2269

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/68 (83%), Positives = 63/68 (92%)
 Frame = -1

Query: 211  TLAKLLNSTLGAICSLSRLSMRTQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHTVDFKM 32
            TLAKLLNSTLG+ICSL+RLS+ TQ+YTLHGHWLQTSTATGRLSMEEPNLQCVEH VDFKM
Sbjct: 1875 TLAKLLNSTLGSICSLARLSVSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVDFKM 1934

Query: 31   SANEKGEG 8
            +  +K EG
Sbjct: 1935 N-GDKNEG 1941


>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
          Length = 2147

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = -1

Query: 211  TLAKLLNSTLGAICSLSRLSMRTQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHTVDFKM 32
            T+AKLLNSTLG+ICSL+RLS+ TQ+YTLHGHWLQTSTATGRLSMEEPNLQCVEH V+FKM
Sbjct: 1797 TMAKLLNSTLGSICSLARLSVSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVEFKM 1856

Query: 31   SANEKGEGTD 2
                +G+  +
Sbjct: 1857 KDENEGDADE 1866


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/65 (83%), Positives = 59/65 (90%)
 Frame = -1

Query: 211  TLAKLLNSTLGAICSLSRLSMRTQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHTVDFKM 32
            TLAKLLN TLG+ICSL+RLS++TQRYTLHGHWLQTSTATGRLSMEEPNLQCVEH V+FKM
Sbjct: 1737 TLAKLLNCTLGSICSLARLSLQTQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHVVEFKM 1796

Query: 31   SANEK 17
                K
Sbjct: 1797 IKGNK 1801


>ref|XP_004168093.1| PREDICTED: DNA polymerase theta-like, partial [Cucumis sativus]
          Length = 1607

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/64 (79%), Positives = 59/64 (92%)
 Frame = -1

Query: 211  TLAKLLNSTLGAICSLSRLSMRTQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHTVDFKM 32
            TLAKL N TLG+ICSL++LS RTQ+YTLHGHWLQTSTATGRLSMEEPNLQCVEH V+FKM
Sbjct: 1264 TLAKLFNCTLGSICSLAKLSARTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVEFKM 1323

Query: 31   SANE 20
            + ++
Sbjct: 1324 NEDD 1327


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