BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033289
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   142   2e-32
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   140   1e-31
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   139   2e-31
gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein ...   126   2e-27
gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...   125   3e-27

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/114 (57%), Positives = 85/114 (74%)
 Frame = +1

Query: 4    WAKWLPWLEYWYNTPSQASIKCSPFKVLYGRDPPALIRFERGSTAVANLEEQLLERDATL 183
            WAKWLPW E+ YNT    S K SPFKVLYGRDPP ++R  +G T+V +LE  L +RDA +
Sbjct: 1365 WAKWLPWAEFSYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQTSVESLEAMLQDRDAII 1424

Query: 184  DDIKAHMVRAQQRMKKYSDAGRREVTFAVGDLVYVNLQPYRQKSLRRQGNQKLS 345
            DD++ ++VRAQQRMK Y+D  R EV F VGD V++ LQPYRQ+SL ++  +KL+
Sbjct: 1425 DDLQVNLVRAQQRMKHYADGSRTEVEFQVGDAVFLRLQPYRQRSLAKRPFEKLA 1478


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  140 bits (353), Expect = 1e-31
 Identities = 62/114 (54%), Positives = 85/114 (74%)
 Frame = +1

Query: 4    WAKWLPWLEYWYNTPSQASIKCSPFKVLYGRDPPALIRFERGSTAVANLEEQLLERDATL 183
            WA+W+ W EYWYNT + +S   +PFK++YGRD P L RFE+GSTA+ +LEEQLL+RDATL
Sbjct: 1298 WAQWISWAEYWYNTSTHSSSHFTPFKIVYGRDSPPLFRFEKGSTAIFSLEEQLLDRDATL 1357

Query: 184  DDIKAHMVRAQQRMKKYSDAGRREVTFAVGDLVYVNLQPYRQKSLRRQGNQKLS 345
            D++K H++ AQ  MK   D  RR V F  G +VY+ +QPYR +SL ++ N+KL+
Sbjct: 1358 DELKFHLLEAQNSMKIQEDKHRRAVHFEPGAMVYLKIQPYRHQSLAKKRNEKLA 1411


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/114 (55%), Positives = 84/114 (73%)
 Frame = +1

Query: 4    WAKWLPWLEYWYNTPSQASIKCSPFKVLYGRDPPALIRFERGSTAVANLEEQLLERDATL 183
            WA WL W EYWYNT   ++   +PF+V+YGR PP L R++R STAVA LE+QLL RDA L
Sbjct: 1134 WANWLCWAEYWYNTFKHSATNFTPFEVVYGRPPPPLYRYKRNSTAVAALEDQLLVRDAVL 1193

Query: 184  DDIKAHMVRAQQRMKKYSDAGRREVTFAVGDLVYVNLQPYRQKSLRRQGNQKLS 345
            D++K H+V AQ  M+   D  RRE+ F VGD+VY+ LQPY+Q+SL ++ N+KL+
Sbjct: 1194 DELKLHLVTAQNNMRTQEDKHRREMHFGVGDMVYLRLQPYKQRSLAKRLNEKLA 1247


>gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/115 (53%), Positives = 87/115 (75%)
 Frame = +1

Query: 4    WAKWLPWLEYWYNTPSQASIKCSPFKVLYGRDPPALIRFERGSTAVANLEEQLLERDATL 183
            W K+L W+E+ +NT   +++K SPFKV+YGRDPP+L+RFE GST   +LE QL ERD  L
Sbjct: 970  WHKYLAWVEFSFNTAYHSALKTSPFKVVYGRDPPSLVRFELGSTDNWDLEVQLKERDLML 1029

Query: 184  DDIKAHMVRAQQRMKKYSDAGRREVTFAVGDLVYVNLQPYRQKSLRRQGNQKLSA 348
            + I+A++ RAQ+ MK+ +D  RR+V FAVGD V++ LQPYRQ+++ R+   KL+A
Sbjct: 1030 EHIRANLQRAQEIMKRNADMKRRDVVFAVGDWVHLKLQPYRQRTVVRRPCYKLAA 1084


>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/115 (52%), Positives = 83/115 (72%)
 Frame = +1

Query: 4    WAKWLPWLEYWYNTPSQASIKCSPFKVLYGRDPPALIRFERGSTAVANLEEQLLERDATL 183
            W K+L W E WYNT    ++K +PF+V+YGR+PPA++RFE GST   +LE  L ERDA L
Sbjct: 2466 WHKFLSWAELWYNTSFHTALKATPFQVVYGREPPAIVRFEEGSTNNYDLEMALRERDAML 2525

Query: 184  DDIKAHMVRAQQRMKKYSDAGRREVTFAVGDLVYVNLQPYRQKSLRRQGNQKLSA 348
              I+ H++RAQ  MK  +D  RRE++FAVGD VY+ L+P+RQ ++ R+  QKL+A
Sbjct: 2526 VQIQQHLLRAQHLMKASADKHRRELSFAVGDWVYLKLKPFRQHTVVRRYCQKLAA 2580