BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033287
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]   129   2e-28
ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ...   120   1e-25
ref|NP_190700.2| pentatricopeptide repeat-containing protein [Ar...   112   4e-23
emb|CAB62654.1| putative protein [Arabidopsis thaliana]               112   4e-23

>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/120 (56%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
 Frame = +3

Query: 3    NVLASFGLMQEAMEILRNMPSFAQSPS-ESSLWAAVLGLCRFKGNIELGEQIAKDLIDHD 179
            N+ A  GL+QEA EILR+MP   +  S ESS WA +L  CRF+G + LGE+IA  LI+ +
Sbjct: 767  NLFAGVGLVQEAEEILRSMPEEDEDLSWESSFWAGLLSSCRFQGXVFLGERIATYLIESE 826

Query: 180  PLNQSYHALLMTVYAVAGQWEDVVRTKETMKERGFKRMPGYTLADLKFIVHNLELENELQ 359
            P N SY+ LL+ VYAVAG+WEDV R KE +KERG K+MPG  LADLK IVH  +L  + Q
Sbjct: 827  PQNISYYRLLLNVYAVAGRWEDVARVKEMVKERGIKQMPGCNLADLKEIVHEFKLGEKWQ 886


>ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Cucumis sativus]
          Length = 575

 Score =  124 bits (310), Expect = 1e-26
 Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
 Frame = +3

Query: 3   NVLASFGLMQEAMEILRNMPSFAQS-PSESSLWAAVLGLCRFKGNIELGEQIAKDLIDHD 179
           NV  + GL+++A+EILRNMP   +   SES +W  +L  CRF G++ LGEQIAK LID +
Sbjct: 445 NVYVAVGLIEQAVEILRNMPEDNEDFSSESVVWIDLLTTCRFVGDVSLGEQIAKYLIDME 504

Query: 180 PLNQSYHALLMTVYAVAGQWEDVVRTKETMKERGFKRMPGYTLADLKFIVHNLELENELQ 359
           P N SY+ LL+ +YAVAG+WEDV R K  MKE+    M G  L DLK IVH+L+L N LQ
Sbjct: 505 PKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLGTMSGCRLVDLKEIVHSLKLGNHLQ 564

Query: 360 NK 365
            +
Sbjct: 565 ER 566


>ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513563|gb|AES95186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score =  120 bits (302), Expect = 1e-25
 Identities = 64/117 (54%), Positives = 82/117 (70%), Gaps = 1/117 (0%)
 Frame = +3

Query: 3   NVLASFGLMQEAMEILRNMPSFAQSPS-ESSLWAAVLGLCRFKGNIELGEQIAKDLIDHD 179
           N+LA+ GL+ EA E L+NM  F    S ES LWA++LGLCRFK ++ LGEQIAK LID D
Sbjct: 434 NLLANVGLIDEAEECLKNMAKFDGYISHESLLWASLLGLCRFKRDVYLGEQIAKLLIDTD 493

Query: 180 PLNQSYHALLMTVYAVAGQWEDVVRTKETMKERGFKRMPGYTLADLKFIVHNLELEN 350
           P N +Y+  L+ +YAVA QWE+V R ++ MKER    +PG  L DLK IVHN ++ N
Sbjct: 494 PNNLAYYQFLLIIYAVAAQWENVSRVQKLMKERKLDIIPGSNLVDLKNIVHNFKVSN 550


>ref|NP_190700.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122230198|sp|Q0WVU0.1|PP278_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g51320 gi|110741620|dbj|BAE98758.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332645257|gb|AEE78778.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 530

 Score =  112 bits (280), Expect = 4e-23
 Identities = 61/129 (47%), Positives = 80/129 (62%)
 Frame = +3

Query: 3   NVLASFGLMQEAMEILRNMPSFAQSPSESSLWAAVLGLCRFKGNIELGEQIAKDLIDHDP 182
           N+ +S G  +EA E L+N+P    +P ES+ WA +L   RF GN  LGE IAK LI+ DP
Sbjct: 395 NLYSSAGFPEEAEEALKNLPDEDVTP-ESTKWANLLSSSRFTGNPTLGESIAKSLIETDP 453

Query: 183 LNQSYHALLMTVYAVAGQWEDVVRTKETMKERGFKRMPGYTLADLKFIVHNLELENELQN 362
           LN  Y+ LLM +Y+V G+WEDV R +E +KER   R+PG  L DLK IVH L L  +   
Sbjct: 454 LNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLGCKEAE 513

Query: 363 KYINHFNME 389
           K     ++E
Sbjct: 514 KVFTETSLE 522


>emb|CAB62654.1| putative protein [Arabidopsis thaliana]
          Length = 486

 Score =  112 bits (280), Expect = 4e-23
 Identities = 61/129 (47%), Positives = 80/129 (62%)
 Frame = +3

Query: 3   NVLASFGLMQEAMEILRNMPSFAQSPSESSLWAAVLGLCRFKGNIELGEQIAKDLIDHDP 182
           N+ +S G  +EA E L+N+P    +P ES+ WA +L   RF GN  LGE IAK LI+ DP
Sbjct: 351 NLYSSAGFPEEAEEALKNLPDEDVTP-ESTKWANLLSSSRFTGNPTLGESIAKSLIETDP 409

Query: 183 LNQSYHALLMTVYAVAGQWEDVVRTKETMKERGFKRMPGYTLADLKFIVHNLELENELQN 362
           LN  Y+ LLM +Y+V G+WEDV R +E +KER   R+PG  L DLK IVH L L  +   
Sbjct: 410 LNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLGCKEAE 469

Query: 363 KYINHFNME 389
           K     ++E
Sbjct: 470 KVFTETSLE 478