BLASTX nr result

ID: Cnidium21_contig00033286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033286
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534110.1| conserved hypothetical protein [Ricinus comm...    85   1e-14
ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249...    82   2e-13
emb|CBI30260.3| unnamed protein product [Vitis vinifera]               82   2e-13
emb|CAN66216.1| hypothetical protein VITISV_041165 [Vitis vinifera]    82   2e-13
ref|NP_181181.1| growth-regulating factor 3 [Arabidopsis thalian...    79   1e-12

>ref|XP_002534110.1| conserved hypothetical protein [Ricinus communis]
           gi|223525833|gb|EEF28270.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 428

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 59/138 (42%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
 Frame = -2

Query: 641 NCRSSETVTETTGFYTSAKNELSEDAS-QILRPFFNDWPRXXXXXXXXXXXXSP---GTC 474
           N RSS+   E  G     +NE++  +   ILR FF+DWPR            SP    TC
Sbjct: 279 NNRSSDPKAEIKGLLLGPQNEVANRSDGHILRHFFDDWPRSLQEPDNTASNASPMNSATC 338

Query: 473 LSISVPGNPLSDFSLKLSTGASGGNHGPEANVEREQPQLQWGTPWGMNHQ--MGGPLAEA 300
           LSIS+ GN  SD SLKLSTG      G   +     PQ+ W   WG N    MGGPLAEA
Sbjct: 339 LSISMSGNSSSDVSLKLSTGNGEEPAGSRGSEREHHPQVNWTGGWGTNQMSPMGGPLAEA 398

Query: 299 LRXXXXXXXXXXSVLHQL 246
           LR          SVLHQL
Sbjct: 399 LR-SSTSNSSPTSVLHQL 415


>ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249368 [Vitis vinifera]
          Length = 394

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 58/143 (40%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
 Frame = -2

Query: 626 ETVTETTGFYTSAKNELSEDA---SQILRPFFNDWPRXXXXXXXXXXXXS-----PGTCL 471
           E  TE  G +      +S D     ++LR FF+DWPR            +       T L
Sbjct: 246 EPKTENKGLFEHRTENVSGDGRSDGRVLRHFFDDWPRSIQEPDNAANGSNNSQATSSTYL 305

Query: 470 SISVPGNPLSDFSLKLSTGASGGNHGPEANVEREQPQLQWGTPWGMNH--QMGGPLAEAL 297
           S+S+ G+  SD SLKLSTG        + N ERE+PQL W   WG +   QMGGPLAEAL
Sbjct: 306 SMSILGHHSSDVSLKLSTGNGDEQSPQDVNAERERPQLNWAAGWGTHQSAQMGGPLAEAL 365

Query: 296 RXXXXXXXXXXSVLHQL-RGAAN 231
           R          SVLHQL RG A+
Sbjct: 366 R-SATSNSSPTSVLHQLPRGTAS 387


>emb|CBI30260.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 58/143 (40%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
 Frame = -2

Query: 626 ETVTETTGFYTSAKNELSEDA---SQILRPFFNDWPRXXXXXXXXXXXXS-----PGTCL 471
           E  TE  G +      +S D     ++LR FF+DWPR            +       T L
Sbjct: 225 EPKTENKGLFEHRTENVSGDGRSDGRVLRHFFDDWPRSIQEPDNAANGSNNSQATSSTYL 284

Query: 470 SISVPGNPLSDFSLKLSTGASGGNHGPEANVEREQPQLQWGTPWGMNH--QMGGPLAEAL 297
           S+S+ G+  SD SLKLSTG        + N ERE+PQL W   WG +   QMGGPLAEAL
Sbjct: 285 SMSILGHHSSDVSLKLSTGNGDEQSPQDVNAERERPQLNWAAGWGTHQSAQMGGPLAEAL 344

Query: 296 RXXXXXXXXXXSVLHQL-RGAAN 231
           R          SVLHQL RG A+
Sbjct: 345 R-SATSNSSPTSVLHQLPRGTAS 366


>emb|CAN66216.1| hypothetical protein VITISV_041165 [Vitis vinifera]
          Length = 437

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 58/143 (40%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
 Frame = -2

Query: 626 ETVTETTGFYTSAKNELSEDA---SQILRPFFNDWPRXXXXXXXXXXXXS-----PGTCL 471
           E  TE  G +      +S D     ++LR FF+DWPR            +       T L
Sbjct: 289 EPKTENKGLFEHXTENVSGDGRSDGRVLRHFFDDWPRSIQEPDNAANGSNNSQATSSTYL 348

Query: 470 SISVPGNPLSDFSLKLSTGASGGNHGPEANVEREQPQLQWGTPWGMNH--QMGGPLAEAL 297
           S+S+ G+  SD SLKLSTG        + N ERE+PQL W   WG +   QMGGPLAEAL
Sbjct: 349 SMSILGHHSSDVSLKLSTGNGDEQSPQDVNAERERPQLNWAAGWGTHQSAQMGGPLAEAL 408

Query: 296 RXXXXXXXXXXSVLHQL-RGAAN 231
           R          SVLHQL RG A+
Sbjct: 409 R-SATSNSSPTSVLHQLPRGTAS 430


>ref|NP_181181.1| growth-regulating factor 3 [Arabidopsis thaliana]
           gi|75206320|sp|Q9SJR5.1|GRF3_ARATH RecName:
           Full=Growth-regulating factor 3; Short=AtGRF3; AltName:
           Full=Transcription activator GRF3
           gi|4581140|gb|AAD24624.1| unknown protein [Arabidopsis
           thaliana] gi|21539884|gb|AAM52878.1| transcription
           activator [Arabidopsis thaliana]
           gi|111074412|gb|ABH04579.1| At2g36400 [Arabidopsis
           thaliana] gi|330254154|gb|AEC09248.1| growth-regulating
           factor 3 [Arabidopsis thaliana]
          Length = 398

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 53/112 (47%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
 Frame = -2

Query: 569 DASQILRPFFNDWPRXXXXXXXXXXXXSPG-TCLSISVPGNPLSDFSLKLSTGASGGNHG 393
           D   ILRPFF+DWPR                TCLSIS+PGN  SD SLKLSTG   G   
Sbjct: 283 DGGHILRPFFDDWPRSSLQEADNSSSPMSSATCLSISMPGNSSSDVSLKLSTGNEEG--A 340

Query: 392 PEANVEREQPQLQWGTPWGMN---HQMGGPLAEALRXXXXXXXXXXSVLHQL 246
              N  R+Q  + W +  G N   H MGGPLAEALR          SVLHQL
Sbjct: 341 RSNNNGRDQQNMSWWSGGGSNHHHHNMGGPLAEALR--SSSSSSPTSVLHQL 390


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