BLASTX nr result

ID: Cnidium21_contig00033242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033242
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ...   103   3e-20
emb|CBI35308.3| unnamed protein product [Vitis vinifera]              103   3e-20
ref|XP_002524633.1| Cyclic nucleotide-gated ion channel, putativ...   101   1e-19
ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ...   100   2e-19
emb|CBI35306.3| unnamed protein product [Vitis vinifera]              100   2e-19

>ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 783

 Score =  103 bits (256), Expect = 3e-20
 Identities = 67/193 (34%), Positives = 104/193 (53%), Gaps = 14/193 (7%)
 Frame = +3

Query: 99  RLSLVVILKVIGHGELYLLFINSKQDDNCII-DISTYGAV--WGKLIDFTTKXXXXXXXX 269
           R  ++  L  I    L+ L ++ +Q++ CII D+S    +  +  + DF           
Sbjct: 215 RFFVISCLLAIFVDPLFFLLLSVQQENKCIIIDLSLTKTIVAFRSMTDFI----YLLNML 270

Query: 270 XXXXVAYVDPESRV-----LVYNPKKVALNYLFGYFILDFILILPMPDKIYQWMIDICNG 434
               +AYV PESRV     LV +PKK+A++YL GYF++D  ++LP+P  +   ++ +  G
Sbjct: 271 LQFRLAYVAPESRVVGAGDLVDHPKKIAIHYLHGYFLIDLFIVLPLPQIMILLVLPMSLG 330

Query: 435 SSGP------VELAYFLQYMALLCRLLSMLADLTTAAFVYNSWLSKFVVNLLAFFLFSHV 596
           SSG       +  A  +QY+  L R L  LA  +++ F++ S  + FV+NLL F L  HV
Sbjct: 331 SSGANYAKNLLRTAVLVQYIPRLYRFLPFLAGQSSSGFIFESAWTNFVINLLTFVLSGHV 390

Query: 597 VGSLWYNFAVFRV 635
           VGS WY F + RV
Sbjct: 391 VGSCWYLFGLQRV 403


>emb|CBI35308.3| unnamed protein product [Vitis vinifera]
          Length = 775

 Score =  103 bits (256), Expect = 3e-20
 Identities = 67/193 (34%), Positives = 104/193 (53%), Gaps = 14/193 (7%)
 Frame = +3

Query: 99  RLSLVVILKVIGHGELYLLFINSKQDDNCII-DISTYGAV--WGKLIDFTTKXXXXXXXX 269
           R  ++  L  I    L+ L ++ +Q++ CII D+S    +  +  + DF           
Sbjct: 207 RFFVISCLLAIFVDPLFFLLLSVQQENKCIIIDLSLTKTIVAFRSMTDFI----YLLNML 262

Query: 270 XXXXVAYVDPESRV-----LVYNPKKVALNYLFGYFILDFILILPMPDKIYQWMIDICNG 434
               +AYV PESRV     LV +PKK+A++YL GYF++D  ++LP+P  +   ++ +  G
Sbjct: 263 LQFRLAYVAPESRVVGAGDLVDHPKKIAIHYLHGYFLIDLFIVLPLPQIMILLVLPMSLG 322

Query: 435 SSGP------VELAYFLQYMALLCRLLSMLADLTTAAFVYNSWLSKFVVNLLAFFLFSHV 596
           SSG       +  A  +QY+  L R L  LA  +++ F++ S  + FV+NLL F L  HV
Sbjct: 323 SSGANYAKNLLRTAVLVQYIPRLYRFLPFLAGQSSSGFIFESAWTNFVINLLTFVLSGHV 382

Query: 597 VGSLWYNFAVFRV 635
           VGS WY F + RV
Sbjct: 383 VGSCWYLFGLQRV 395


>ref|XP_002524633.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223536102|gb|EEF37758.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 778

 Score =  101 bits (251), Expect = 1e-19
 Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
 Frame = +3

Query: 99  RLSLVVILKVIGHGELYLLFINSKQDDNCII---DISTYGAVWGKLIDFTTKXXXXXXXX 269
           +  ++  L  I    L+   ++ +Q++ CI+    ++T   V+  + DF           
Sbjct: 210 KFCVICCLVAIFVDPLFFFMLSVQQENKCIVINWPLTTTIIVFRSMTDFI----YLLNIL 265

Query: 270 XXXXVAYVDPESRV-----LVYNPKKVALNYLFGYFILDFILILPMPDKIYQWMIDICNG 434
               +AY+ PESRV     LV +PKK+A+NYL GYF++D  ++LP+P  I   ++    G
Sbjct: 266 LQFRLAYIAPESRVVGAGELVDHPKKIAMNYLCGYFLVDLFIMLPLPQIIILLVLPNGLG 325

Query: 435 SSGP------VELAYFLQYMALLCRLLSMLADLTTAAFVYNSWLSKFVVNLLAFFLFSHV 596
           SSG       ++ A  +QY+  L R L +L  ++ + F++ +  S F +NLL F L  HV
Sbjct: 326 SSGANYAKNLLQAAVLVQYVPRLYRFLPLLVGVSPSGFIFETAWSNFFINLLTFILSGHV 385

Query: 597 VGSLWYNFAVFRV 635
           VG+LWY F + RV
Sbjct: 386 VGALWYLFGLQRV 398


>ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 779

 Score =  100 bits (250), Expect = 2e-19
 Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 14/193 (7%)
 Frame = +3

Query: 99  RLSLVVILKVIGHGELYLLFINSKQDDNCII---DISTYGAVWGKLIDFTTKXXXXXXXX 269
           R  ++  L  I    L+ L ++ +Q++ CII    ++    V+  + DF           
Sbjct: 209 RFFVISCLLAIFVDPLFFLLLSVQQENKCIIIDMPLTKTIVVFRSMTDFI----YLLNML 264

Query: 270 XXXXVAYVDPESRV-----LVYNPKKVALNYLFGYFILDFILILPMPDKIYQWMIDICNG 434
               +AYV PESRV     LV +PKK+A++YL GYF++D  ++LP+P  +   ++ +  G
Sbjct: 265 LQFRLAYVAPESRVVGAGDLVDHPKKIAIHYLCGYFLIDLFIVLPLPQIMILLVLPMSLG 324

Query: 435 SSGP------VELAYFLQYMALLCRLLSMLADLTTAAFVYNSWLSKFVVNLLAFFLFSHV 596
           +SG       +  A  +QY+  L R L  LA  + + F++ S  + FV+NLL F L  HV
Sbjct: 325 TSGANYAKNLLRTAVLVQYIPRLYRFLPFLAGQSPSGFIFESAWANFVINLLTFVLSGHV 384

Query: 597 VGSLWYNFAVFRV 635
           VGS WY F + RV
Sbjct: 385 VGSCWYLFGLQRV 397


>emb|CBI35306.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  100 bits (250), Expect = 2e-19
 Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 14/193 (7%)
 Frame = +3

Query: 99  RLSLVVILKVIGHGELYLLFINSKQDDNCII---DISTYGAVWGKLIDFTTKXXXXXXXX 269
           R  ++  L  I    L+ L ++ +Q++ CII    ++    V+  + DF           
Sbjct: 207 RFFVISCLLAIFVDPLFFLLLSVQQENKCIIIDMPLTKTIVVFRSMTDFI----YLLNML 262

Query: 270 XXXXVAYVDPESRV-----LVYNPKKVALNYLFGYFILDFILILPMPDKIYQWMIDICNG 434
               +AYV PESRV     LV +PKK+A++YL GYF++D  ++LP+P  +   ++ +  G
Sbjct: 263 LQFRLAYVAPESRVVGAGDLVDHPKKIAIHYLCGYFLIDLFIVLPLPQIMILLVLPMSLG 322

Query: 435 SSGP------VELAYFLQYMALLCRLLSMLADLTTAAFVYNSWLSKFVVNLLAFFLFSHV 596
           +SG       +  A  +QY+  L R L  LA  + + F++ S  + FV+NLL F L  HV
Sbjct: 323 TSGANYAKNLLRTAVLVQYIPRLYRFLPFLAGQSPSGFIFESAWANFVINLLTFVLSGHV 382

Query: 597 VGSLWYNFAVFRV 635
           VGS WY F + RV
Sbjct: 383 VGSCWYLFGLQRV 395


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