BLASTX nr result

ID: Cnidium21_contig00033227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033227
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]              120   9e-26
ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_003555643.1| PREDICTED: G-type lectin S-receptor-like ser...   118   6e-25
ref|XP_002299255.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24

>ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|222869874|gb|EEF07005.1|
           predicted protein [Populus trichocarpa]
          Length = 691

 Score =  120 bits (302), Expect = 9e-26
 Identities = 63/100 (63%), Positives = 75/100 (75%), Gaps = 2/100 (2%)
 Frame = -1

Query: 299 LWSSGT--GTTSDQVSHALFNDTGNFLLLNSNSTKLWESFNYPTDTLLPTQIMQIDGVLY 126
           +WSSG+  GT    VS  + NDTGNF+L NSNS +LWESF+ PTDTLLPTQIM++ GV+ 
Sbjct: 87  IWSSGSLLGT----VSSGVMNDTGNFVLQNSNSFRLWESFSNPTDTLLPTQIMEVGGVVS 142

Query: 125 SRRSEINFSRGRFQLRLLKDGNLVLNTREIFTNFAYKAYY 6
           SRR+E NFS GRFQLRLL +GNLVLN   + T F Y  YY
Sbjct: 143 SRRTETNFSLGRFQLRLLDNGNLVLNYMNLPTKFVYDDYY 182


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/99 (61%), Positives = 73/99 (73%)
 Frame = -1

Query: 302 ELWSSGTGTTSDQVSHALFNDTGNFLLLNSNSTKLWESFNYPTDTLLPTQIMQIDGVLYS 123
           ++WSSG    +  VS  + NDTGNF+L N NS +LWESFN PTDTLLPTQIM++ GV+ S
Sbjct: 147 QIWSSGIPPGA-AVSSGVMNDTGNFVLQNRNSFRLWESFNNPTDTLLPTQIMEVGGVVSS 205

Query: 122 RRSEINFSRGRFQLRLLKDGNLVLNTREIFTNFAYKAYY 6
           RR+E NFS GRFQLRLL +GNLVLN   + T F Y  YY
Sbjct: 206 RRTETNFSLGRFQLRLLDNGNLVLNYMNLPTKFVYDDYY 244


>ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|222841463|gb|EEE79010.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/86 (67%), Positives = 67/86 (77%)
 Frame = -1

Query: 263 VSHALFNDTGNFLLLNSNSTKLWESFNYPTDTLLPTQIMQIDGVLYSRRSEINFSRGRFQ 84
           VS  + NDTGNF+L N NS +LWESFN PTDTLLPTQIM+  GV+ SRR+E NFS GRFQ
Sbjct: 108 VSSGVMNDTGNFVLQNRNSERLWESFNNPTDTLLPTQIMEAGGVVSSRRTETNFSLGRFQ 167

Query: 83  LRLLKDGNLVLNTREIFTNFAYKAYY 6
           LRLL +GNLVLN+  + T FAY  YY
Sbjct: 168 LRLLDNGNLVLNSMNLSTKFAYDDYY 193


>ref|XP_003555643.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase RLK1-like [Glycine max]
          Length = 800

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/100 (59%), Positives = 72/100 (72%)
 Frame = -1

Query: 302 ELWSSGTGTTSDQVSHALFNDTGNFLLLNSNSTKLWESFNYPTDTLLPTQIMQIDGVLYS 123
           ELW+S     S  +S+ L NDTGNF LL+ NS  LW+SF+ PTDTL+PTQIM++ G L S
Sbjct: 109 ELWTSQL--ISGTISYGLMNDTGNFQLLDENSQVLWDSFSNPTDTLVPTQIMEVKGTLSS 166

Query: 122 RRSEINFSRGRFQLRLLKDGNLVLNTREIFTNFAYKAYYI 3
           R+ E NFSRGRFQ RLL DGN VLN   + TN+ Y A+YI
Sbjct: 167 RQKEANFSRGRFQFRLLPDGNAVLNPINLPTNYTYDAHYI 206


>ref|XP_002299255.1| predicted protein [Populus trichocarpa] gi|222846513|gb|EEE84060.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/99 (56%), Positives = 71/99 (71%)
 Frame = -1

Query: 302 ELWSSGTGTTSDQVSHALFNDTGNFLLLNSNSTKLWESFNYPTDTLLPTQIMQIDGVLYS 123
           E+W SG G  + + ++   NDTGNFL+ N+N  KLW+SF   TDTLLPTQIM+  G+L S
Sbjct: 110 EIWKSGPG--NGEAAYGFMNDTGNFLVANANGEKLWQSFELLTDTLLPTQIMEKGGILSS 167

Query: 122 RRSEINFSRGRFQLRLLKDGNLVLNTREIFTNFAYKAYY 6
           R SE NFS+GRFQ RL+ DGN VLNT  + T F Y+AY+
Sbjct: 168 RLSETNFSQGRFQFRLIPDGNAVLNTINLPTGFPYEAYF 206


Top