BLASTX nr result

ID: Cnidium21_contig00033197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033197
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280424.1| PREDICTED: F-box/kelch-repeat protein At3g23...    75   7e-12
emb|CAN75235.1| hypothetical protein VITISV_008502 [Vitis vinifera]    75   7e-12
emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]    67   1e-09
gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]    66   3e-09
gb|ABO92990.1| F-box domain-containing protein [Solanum tuberosum]     64   1e-08

>ref|XP_002280424.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Vitis
           vinifera]
          Length = 397

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
 Frame = +3

Query: 156 SYNGIICLC---DDNDVIYLWNPSIREFKKLXXXXXXXXXHLARYDKVAFGYDSISDDYK 326
           SYNG++C C    +ND+I++WNPS REF++L         HL  Y    FGYDSI+DDYK
Sbjct: 126 SYNGLVCFCIRDTENDIIFVWNPSTREFRRLPPISFMQCFHLVAY---GFGYDSIADDYK 182

Query: 327 VLRL-LYENSRDITRKVYLYSTNTDSWRRFQD 419
           V R+  Y   R    +V ++S   + WR+ ++
Sbjct: 183 VTRVGCYCIGRYYEYQVRVFSLRGNVWRKIEN 214


>emb|CAN75235.1| hypothetical protein VITISV_008502 [Vitis vinifera]
          Length = 453

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
 Frame = +3

Query: 156 SYNGIICLC---DDNDVIYLWNPSIREFKKLXXXXXXXXXHLARYDKVAFGYDSISDDYK 326
           SYNG++C C    +ND+I++WNPS REF++L         HL  Y    FGYDSI+DDYK
Sbjct: 126 SYNGLVCFCIRDTENDIIFVWNPSTREFRRLPPISFMQCFHLVAY---GFGYDSIADDYK 182

Query: 327 VLRL-LYENSRDITRKVYLYSTNTDSWRRFQD 419
           V R+  Y   R    +V ++S   + WR+ ++
Sbjct: 183 VTRVGCYCIGRYYEYQVRVFSLRGNVWRKIEN 214


>emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]
          Length = 265

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
 Frame = +3

Query: 141 DVASCSYNGIICLCD---DNDVIYLWNPSIREFKKLXXXXXXXXXHLARYDKVAFGYDSI 311
           ++  C YNG++C+     + D I++WNPSI+E K+L         +L  Y   AFGYDSI
Sbjct: 100 EIVGC-YNGLVCISIRDMEKDTIFVWNPSIKESKRLPSKPFEQLFYLVSY---AFGYDSI 155

Query: 312 SDDYKVLRLLYENSRD-ITRKVYLYSTNTDSWRRFQ 416
           +DDYKV+RL+  +  D     V ++S  +++WR+ +
Sbjct: 156 TDDYKVVRLVCCSINDSYEYHVEVFSLRSNAWRKIR 191


>gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 372

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
 Frame = +3

Query: 156 SYNGIICLCDDNDVIYLWNPSIREFKKLXXXXXXXXXHLARYDKVAFGYDSISDDYK--V 329
           S NG+ICL    +   LWNP++++ KKL           + Y K  FGYD   DDYK  V
Sbjct: 109 SVNGLICLYSKIEETVLWNPAVKKSKKLPTLGAKLRNGCSYYLKYGFGYDETRDDYKVVV 168

Query: 330 LRLLYENSRDITRKVYLYSTNTDSWR 407
           ++ +YE+S      V +YS   DSWR
Sbjct: 169 IQCIYEDSGSCDSVVNIYSLKADSWR 194


>gb|ABO92990.1| F-box domain-containing protein [Solanum tuberosum]
          Length = 431

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
 Frame = +3

Query: 156 SYNGIICLCDDNDVIYLWNPSIREFKKLXXXXXXXXXHLARYDKVAFGYDSISDDYKVLR 335
           S NG+ICLC+     Y+WNP+IR+ KK+         +     K+ FGYD   DDYKV+ 
Sbjct: 133 SVNGLICLCNHELETYIWNPTIRKLKKIHDSPLRSSSN----TKLGFGYDESRDDYKVVF 188

Query: 336 LLYE---------NSRDITRKVYLYSTNTDSWRRFQD 419
           + Y          N  +    VY+YS  TDSW    D
Sbjct: 189 INYSSLCYYDSMCNVSNPKIVVYIYSLRTDSWTTVHD 225


Top