BLASTX nr result
ID: Cnidium21_contig00033192
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00033192 (511 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518733.1| polyadenylate-binding protein, putative [Ric... 59 4e-07 ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|2... 59 5e-07 emb|CBI32381.3| unnamed protein product [Vitis vinifera] 58 7e-07 ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [... 58 7e-07 gb|ADE76290.1| unknown [Picea sitchensis] 58 9e-07 >ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis] gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis] Length = 644 Score = 58.9 bits (141), Expect = 4e-07 Identities = 34/60 (56%), Positives = 36/60 (60%) Frame = +2 Query: 38 RPLRMYPLTLPMYPSPLQMYPLPGPGFGQQIFYPQALPTLIPLQQRGFWYQQ*LNPCMRP 217 RP+ M P P P MYP GPG GQQIFY QA P +IP Q GF YQQ L P MRP Sbjct: 399 RPVAMAPSVAPRMP----MYPPGGPGLGQQIFYGQAPPAIIP-PQPGFGYQQQLVPGMRP 453 >ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa] Length = 644 Score = 58.5 bits (140), Expect = 5e-07 Identities = 38/72 (52%), Positives = 40/72 (55%) Frame = +2 Query: 2 SQMRPIALTSPGRPLRMYPLTLPMYPSPLQMYPLPGPGFGQQIFYPQALPTLIPLQQRGF 181 SQMRP+A M P P P MYP GPG GQQIFY QA P +IP Q GF Sbjct: 397 SQMRPVA---------MAPSVGPRMP----MYPPAGPGLGQQIFYGQAPPAIIP-PQPGF 442 Query: 182 WYQQ*LNPCMRP 217 YQQ L P MRP Sbjct: 443 GYQQQLVPGMRP 454 >emb|CBI32381.3| unnamed protein product [Vitis vinifera] Length = 766 Score = 58.2 bits (139), Expect = 7e-07 Identities = 33/60 (55%), Positives = 37/60 (61%) Frame = +2 Query: 38 RPLRMYPLTLPMYPSPLQMYPLPGPGFGQQIFYPQALPTLIPLQQRGFWYQQ*LNPCMRP 217 RP+ M P +P P MYP GPG GQQ+FY QA P +IP Q GF YQQ L P MRP Sbjct: 544 RPVPMPPSVVPRLP----MYPPSGPGLGQQMFYGQAPPAIIP-PQPGFGYQQQLVPGMRP 598 >ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera] gi|147839912|emb|CAN65906.1| hypothetical protein VITISV_004873 [Vitis vinifera] Length = 648 Score = 58.2 bits (139), Expect = 7e-07 Identities = 33/60 (55%), Positives = 37/60 (61%) Frame = +2 Query: 38 RPLRMYPLTLPMYPSPLQMYPLPGPGFGQQIFYPQALPTLIPLQQRGFWYQQ*LNPCMRP 217 RP+ M P +P P MYP GPG GQQ+FY QA P +IP Q GF YQQ L P MRP Sbjct: 405 RPVPMPPSVVPRLP----MYPPSGPGLGQQMFYGQAPPAIIP-PQPGFGYQQQLVPGMRP 459 >gb|ADE76290.1| unknown [Picea sitchensis] Length = 313 Score = 57.8 bits (138), Expect = 9e-07 Identities = 29/50 (58%), Positives = 31/50 (62%) Frame = +2 Query: 68 PMYPSPLQMYPLPGPGFGQQIFYPQALPTLIPLQQRGFWYQQ*LNPCMRP 217 P P+ + MYP GPG QQIFY Q P LIP Q GF YQQ L P MRP Sbjct: 69 PAVPARVPMYPPGGPGLNQQIFYGQGPPALIPPQAAGFGYQQQLIPGMRP 118