BLASTX nr result

ID: Cnidium21_contig00033192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033192
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518733.1| polyadenylate-binding protein, putative [Ric...    59   4e-07
ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
emb|CBI32381.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [...    58   7e-07
gb|ADE76290.1| unknown [Picea sitchensis]                              58   9e-07

>ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223542114|gb|EEF43658.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 644

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/60 (56%), Positives = 36/60 (60%)
 Frame = +2

Query: 38  RPLRMYPLTLPMYPSPLQMYPLPGPGFGQQIFYPQALPTLIPLQQRGFWYQQ*LNPCMRP 217
           RP+ M P   P  P    MYP  GPG GQQIFY QA P +IP  Q GF YQQ L P MRP
Sbjct: 399 RPVAMAPSVAPRMP----MYPPGGPGLGQQIFYGQAPPAIIP-PQPGFGYQQQLVPGMRP 453


>ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|222847485|gb|EEE85032.1|
           predicted protein [Populus trichocarpa]
          Length = 644

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 38/72 (52%), Positives = 40/72 (55%)
 Frame = +2

Query: 2   SQMRPIALTSPGRPLRMYPLTLPMYPSPLQMYPLPGPGFGQQIFYPQALPTLIPLQQRGF 181
           SQMRP+A         M P   P  P    MYP  GPG GQQIFY QA P +IP  Q GF
Sbjct: 397 SQMRPVA---------MAPSVGPRMP----MYPPAGPGLGQQIFYGQAPPAIIP-PQPGF 442

Query: 182 WYQQ*LNPCMRP 217
            YQQ L P MRP
Sbjct: 443 GYQQQLVPGMRP 454


>emb|CBI32381.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/60 (55%), Positives = 37/60 (61%)
 Frame = +2

Query: 38  RPLRMYPLTLPMYPSPLQMYPLPGPGFGQQIFYPQALPTLIPLQQRGFWYQQ*LNPCMRP 217
           RP+ M P  +P  P    MYP  GPG GQQ+FY QA P +IP  Q GF YQQ L P MRP
Sbjct: 544 RPVPMPPSVVPRLP----MYPPSGPGLGQQMFYGQAPPAIIP-PQPGFGYQQQLVPGMRP 598


>ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
           gi|147839912|emb|CAN65906.1| hypothetical protein
           VITISV_004873 [Vitis vinifera]
          Length = 648

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/60 (55%), Positives = 37/60 (61%)
 Frame = +2

Query: 38  RPLRMYPLTLPMYPSPLQMYPLPGPGFGQQIFYPQALPTLIPLQQRGFWYQQ*LNPCMRP 217
           RP+ M P  +P  P    MYP  GPG GQQ+FY QA P +IP  Q GF YQQ L P MRP
Sbjct: 405 RPVPMPPSVVPRLP----MYPPSGPGLGQQMFYGQAPPAIIP-PQPGFGYQQQLVPGMRP 459


>gb|ADE76290.1| unknown [Picea sitchensis]
          Length = 313

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/50 (58%), Positives = 31/50 (62%)
 Frame = +2

Query: 68  PMYPSPLQMYPLPGPGFGQQIFYPQALPTLIPLQQRGFWYQQ*LNPCMRP 217
           P  P+ + MYP  GPG  QQIFY Q  P LIP Q  GF YQQ L P MRP
Sbjct: 69  PAVPARVPMYPPGGPGLNQQIFYGQGPPALIPPQAAGFGYQQQLIPGMRP 118