BLASTX nr result

ID: Cnidium21_contig00033177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033177
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV25893.1| starch synthase isoform I [Manihot esculenta]           41   3e-07
ref|XP_002277372.1| PREDICTED: soluble starch synthase, chloropl...    41   4e-07
emb|CBI23015.3| unnamed protein product [Vitis vinifera]               41   4e-07
ref|XP_001784416.1| predicted protein [Physcomitrella patens sub...    41   2e-06
ref|XP_003527986.1| PREDICTED: soluble starch synthase, chloropl...    39   3e-06

>gb|ABV25893.1| starch synthase isoform I [Manihot esculenta]
          Length = 633

 Score = 40.8 bits (94), Expect(2) = 3e-07
 Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 26/76 (34%)
 Frame = -1

Query: 314 GKLYEVSLFREFRDGVDWL--------------------------SSTLLCHAACEAPWC 213
           G   +VS F E+R+GVDW+                            TLLCHAACEAP  
Sbjct: 192 GGAQDVSFFHEYREGVDWVFVDHPSYHRPGNPYGDSRGAFGDNQFRFTLLCHAACEAPLV 251

Query: 212 FLYAGLLSGIVCFLLS 165
               G   G  C  L+
Sbjct: 252 LPLGGYTYGEKCLFLA 267



 Score = 38.5 bits (88), Expect(2) = 3e-07
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
 Frame = -2

Query: 139 GVGPASNYSIWGLPREYYESVQWKPPG---IYPPGTKDSVNVLKGAMLT 2
           GV PA  Y  +GLP E+Y +++W  P     +     ++VNVLKGA++T
Sbjct: 305 GVEPAVTYKNFGLPSEWYGALEWVFPNWARAHALDKGEAVNVLKGAIVT 353


>ref|XP_002277372.1| PREDICTED: soluble starch synthase, chloroplastic/amyloplastic-like
           [Vitis vinifera]
          Length = 633

 Score = 41.2 bits (95), Expect(2) = 4e-07
 Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 26/75 (34%)
 Frame = -1

Query: 314 GKLYEVSLFREFRDGVDWL--------------------------SSTLLCHAACEAPWC 213
           G + EVS F E+R GVDW+                            TLLCHAACEAP  
Sbjct: 192 GGVQEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDGYGAFGDNQFRFTLLCHAACEAPLV 251

Query: 212 FLYAGLLSGIVCFLL 168
               G   G  C  L
Sbjct: 252 LPLGGFTYGEKCLFL 266



 Score = 37.7 bits (86), Expect(2) = 4e-07
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = -2

Query: 139 GVGPASNYSIWGLPREYYESVQWKPP---GIYPPGTKDSVNVLKGAMLT 2
           GV PA  Y   GLP E+Y +V+W  P     +   T  +VN+LKGA++T
Sbjct: 305 GVEPAVTYDNLGLPPEWYGAVEWVFPTWARTHALDTGQAVNLLKGAIVT 353


>emb|CBI23015.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 41.2 bits (95), Expect(2) = 4e-07
 Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 26/75 (34%)
 Frame = -1

Query: 314 GKLYEVSLFREFRDGVDWL--------------------------SSTLLCHAACEAPWC 213
           G + EVS F E+R GVDW+                            TLLCHAACEAP  
Sbjct: 127 GGVQEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDGYGAFGDNQFRFTLLCHAACEAPLV 186

Query: 212 FLYAGLLSGIVCFLL 168
               G   G  C  L
Sbjct: 187 LPLGGFTYGEKCLFL 201



 Score = 37.7 bits (86), Expect(2) = 4e-07
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = -2

Query: 139 GVGPASNYSIWGLPREYYESVQWKPP---GIYPPGTKDSVNVLKGAMLT 2
           GV PA  Y   GLP E+Y +V+W  P     +   T  +VN+LKGA++T
Sbjct: 240 GVEPAVTYDNLGLPPEWYGAVEWVFPTWARTHALDTGQAVNLLKGAIVT 288


>ref|XP_001784416.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|168064958|ref|XP_001784424.1| predicted protein
           [Physcomitrella patens subsp. patens]
           gi|162664033|gb|EDQ50768.1| predicted protein
           [Physcomitrella patens subsp. patens]
           gi|162664041|gb|EDQ50776.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 527

 Score = 41.2 bits (95), Expect(2) = 2e-06
 Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 26/76 (34%)
 Frame = -1

Query: 314 GKLYEVSLFREFRDGVDWL--------------------------SSTLLCHAACEAPWC 213
           G  +EV+ F EFR GVDW+                            TLLCHAACEAP  
Sbjct: 86  GATHEVAFFHEFRAGVDWVFVDHPSYHRQGTPYGDTRGAFGDNQFRFTLLCHAACEAPLV 145

Query: 212 FLYAGLLSGIVCFLLS 165
               G   G  C  ++
Sbjct: 146 LALGGYTYGEKCVFVA 161



 Score = 35.0 bits (79), Expect(2) = 2e-06
 Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
 Frame = -2

Query: 139 GVGPASNYSIWGLPREYYESVQWKPP---GIYPPGTKDSVNVLKGAMLT 2
           GV PA+ +S  G+P E+Y +++W  P    ++     ++VN LKGA++T
Sbjct: 199 GVEPATTFSNLGIPLEWYGALEWVFPEWARLHALDKGEAVNHLKGAVVT 247


>ref|XP_003527986.1| PREDICTED: soluble starch synthase, chloroplastic/amyloplastic-like
           [Glycine max]
          Length = 647

 Score = 39.3 bits (90), Expect(2) = 3e-06
 Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 26/76 (34%)
 Frame = -1

Query: 314 GKLYEVSLFREFRDGVDWL--------------------------SSTLLCHAACEAPWC 213
           G   E+  + E+R+GVDW+                            TLLCHAACEAP  
Sbjct: 208 GGAQEIGFYHEYREGVDWVFVDHPSFHRPGNPYGDTFGTFGDNQFRFTLLCHAACEAPLV 267

Query: 212 FLYAGLLSGIVCFLLS 165
               G   G  C  L+
Sbjct: 268 LPLGGFTYGEKCLFLA 283



 Score = 36.6 bits (83), Expect(2) = 3e-06
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = -2

Query: 139 GVGPASNYSIWGLPREYYESVQWKPP---GIYPPGTKDSVNVLKGAMLT 2
           GV PA  YS  GLP E+Y ++ W  P     +   T ++VN LKGA++T
Sbjct: 321 GVEPAITYSNLGLPPEWYGALGWVFPTWARTHALDTGEAVNFLKGAVVT 369


Top