BLASTX nr result
ID: Cnidium21_contig00033176
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00033176 (873 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24978.3| unnamed protein product [Vitis vinifera] 280 3e-73 ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing pro... 275 1e-71 ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|2... 271 2e-70 ref|NP_001190063.1| F-box/WD-40 repeat-containing protein [Arabi... 250 3e-64 ref|XP_003599502.1| F-box/WD-40 repeat-containing protein [Medic... 245 1e-62 >emb|CBI24978.3| unnamed protein product [Vitis vinifera] Length = 435 Score = 280 bits (716), Expect = 3e-73 Identities = 149/282 (52%), Positives = 184/282 (65%) Frame = +2 Query: 26 RTPAKKRILKSPANAQAALTHDTXXXXXXXXXXXXXXHCSAVCKSWNCVISTSTLFRNLY 205 ++ A+KR+ S +L HD CSAVCKSWN VI+ S L + LY Sbjct: 9 QSQAQKRM--SSRVPATSLAHDILCMIFVLLDLFDLVRCSAVCKSWNKVINKSKLLQILY 66 Query: 206 YKQKRSQSRNVLEESCCSEKTSKMCLKELALDSHRTSLQEGSIDIYQWKGHLARVNQCRM 385 +KQ+ S S CSEK K+C+++LA++ HR SLQ G IDI QWKGH R QCRM Sbjct: 67 HKQQGG-SIGPSSTSHCSEKPLKVCIEQLAMEHHRLSLQ-GLIDIEQWKGHSVRAGQCRM 124 Query: 386 KMGLVLTGGDDKVMRLWSVKSYKCLEEYSVPDRARLIDFDFDESKIVSLVGASIGIWRRN 565 KMGL+LTG DK +RLWS++SYKCLEE+ +P+ A L+DFDFDE+KIV L+G I WRRN Sbjct: 125 KMGLILTGVGDKAVRLWSLESYKCLEEHFLPNLAPLVDFDFDENKIVGLIGTRICTWRRN 184 Query: 566 GKNNIFLSREGEIPKASCMCYVDPEAVVGCEDGRARFLDMYSRKWSKIVKIQDGPVTCIS 745 GK +IF SREG K CM Y+DPEAVVGCEDG AR DMYSRK S+I+++ GPV C++ Sbjct: 185 GKRSIFPSREGTFMKGLCMRYIDPEAVVGCEDGTARVFDMYSRKCSRIIRMHSGPVRCLA 244 Query: 746 LSDTQMXXXXXXXXXXTVSDLSSAQRAATLKSFGSAGISTLC 871 LSD Q T+S LSS QR A L+S S GI TLC Sbjct: 245 LSDDQCIISGSSLGSITISGLSSDQRIAKLRSTDSTGIRTLC 286 >ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like [Vitis vinifera] Length = 421 Score = 275 bits (703), Expect = 1e-71 Identities = 145/266 (54%), Positives = 176/266 (66%), Gaps = 1/266 (0%) Frame = +2 Query: 77 ALTHDTXXXXXXXXXXXXXXHCSAVCKSWNCVISTSTLFRNLYYKQKRSQSRNVLEESCC 256 +L HD CSAVCKSWN VI+ S L + LY+KQ+ S S C Sbjct: 9 SLAHDILCMIFVLLDLFDLVRCSAVCKSWNKVINKSKLLQILYHKQQGG-SIGPSSTSHC 67 Query: 257 SEKTSKMCLKELALDSHRTSLQEGSIDIYQWKGHLARVNQCRMKMGLVLTGGDDKVMRLW 436 SEK K+C+++LA++ HR SLQ G IDI QWKGH R QCRMKMGL+LTG DK +RLW Sbjct: 68 SEKPLKVCIEQLAMEHHRLSLQ-GLIDIEQWKGHSVRAGQCRMKMGLILTGVGDKAVRLW 126 Query: 437 SVKSYKCLEEYSVPDRARLIDFDFDESKIVSLVGASIGIWRRNGKNNIFLSREGEIPKAS 616 S++SYKCLEE+ +P+ A L+DFDFDE+KIV L+G I WRRNGK +IF SREG K Sbjct: 127 SLESYKCLEEHFLPNLAPLVDFDFDENKIVGLIGTRICTWRRNGKRSIFPSREGTFMKGL 186 Query: 617 CMCYVDPEAVVGCEDGRARFLDMYSRKWSKIVKIQDGPVTCISLSDTQMXXXXXXXXXXT 796 CM Y+DPEAVVGCEDG AR DMYSRK S+I+++ GPV C++LSD Q T Sbjct: 187 CMRYIDPEAVVGCEDGTARVFDMYSRKCSRIIRMHSGPVRCLALSDDQCIISGSSLGSIT 246 Query: 797 VSDLSSAQRAATLKSFGS-AGISTLC 871 +S LSS QR A L+S S GI TLC Sbjct: 247 ISGLSSDQRIAKLRSTDSTGGIRTLC 272 >ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|222850467|gb|EEE88014.1| predicted protein [Populus trichocarpa] Length = 444 Score = 271 bits (692), Expect = 2e-70 Identities = 150/295 (50%), Positives = 185/295 (62%), Gaps = 13/295 (4%) Frame = +2 Query: 26 RTPAKKRILKSPANAQAALTHDTXXXXXXXXXXXXXXHCSAVCKSWNCVISTSTLFRNLY 205 R+P KKR +P + ++ L HD SAVCK WN +I S L + LY Sbjct: 9 RSPPKKRSSTTPTSIRS-LEHDALCIIFSYLGLFDVVRSSAVCKFWNEIIKRSKLLQLLY 67 Query: 206 YKQKRSQSRNVLEESCCSEKTSKMCLKELALDSHRTSLQEGSIDIYQWKGHLARVNQCRM 385 KQ+R SR S SE++ + L+ELA++ R SL +GS+ I QWKGH V+QCRM Sbjct: 68 LKQQRRSSR-----SDFSEESLNVYLEELAIEHQRQSLVQGSLHIDQWKGHSLGVDQCRM 122 Query: 386 KMGLVLTGGDDKVMRLWSVKSYKCLEEYSVPDRARLIDFDFDESK-------------IV 526 K GLVLTG DKVMRLWS++SYKC+EEYS+PD L+DFDFDESK IV Sbjct: 123 KRGLVLTGVGDKVMRLWSLESYKCIEEYSIPDGVPLVDFDFDESKAVVPYIDIVHRIVIV 182 Query: 527 SLVGASIGIWRRNGKNNIFLSREGEIPKASCMCYVDPEAVVGCEDGRARFLDMYSRKWSK 706 LVG I IWRRNG+ +IF SREG+ K SCM Y DPEAVVGCEDG AR DMYS+K S+ Sbjct: 183 GLVGTRICIWRRNGQRSIFPSREGQFMKGSCMRYFDPEAVVGCEDGTARVFDMYSKKCSR 242 Query: 707 IVKIQDGPVTCISLSDTQMXXXXXXXXXXTVSDLSSAQRAATLKSFGSAGISTLC 871 IV++ PVTC+SLS+ Q+ T+S LSS QR ATL+ S GI +LC Sbjct: 243 IVRMHTEPVTCLSLSEDQLIISGSSLGRITISGLSSDQRVATLRPTDSTGIKSLC 297 >ref|NP_001190063.1| F-box/WD-40 repeat-containing protein [Arabidopsis thaliana] gi|332645356|gb|AEE78877.1| F-box/WD-40 repeat-containing protein [Arabidopsis thaliana] Length = 433 Score = 250 bits (638), Expect = 3e-64 Identities = 134/286 (46%), Positives = 175/286 (61%), Gaps = 1/286 (0%) Frame = +2 Query: 17 SGVRTPAKKRILKSPANAQAALTHDTXXXXXXXXXXXXXXHCSAVCKSWNCVISTSTLFR 196 +G + A+K K P + ++ L D HC+ VC SWN VI L + Sbjct: 6 TGDESSARKMRRKVPTSIES-LDADILCIIFSFLDLFDLVHCTVVCNSWNAVIKRLKLLQ 64 Query: 197 NLYYKQKRSQSRNVLEESCCSEKTSKMCLKELALDSHRTSLQEGSIDIYQWKGHLARVNQ 376 K S + S ++ +++ +++ A+ H+ +L G I+I +W+ H RV+Q Sbjct: 65 ASCRKMHHLGSDSP-SSSTSLDRPAEIDVEDFAMKHHKMALLRGRIEIERWEAHSHRVSQ 123 Query: 377 CRMKMGLVLTGGDDKVMRLWSVKSYKCLEEYSVPDRARLIDFDFDESKIVSLVGASIGIW 556 CRMK GL+LTG DKVMRLWS+KSYKC+EEYS+PD + LIDFDFDESKIV LVG I IW Sbjct: 124 CRMKKGLLLTGVGDKVMRLWSLKSYKCMEEYSLPDASSLIDFDFDESKIVGLVGTRISIW 183 Query: 557 RRNGKNNIFLSREGEIPKASCMCYVDPEAVVGCEDGRARFLDMYSRKWSKIVKIQDGPVT 736 RRNG+ +IF SR G PK CM Y+DPEAVVGCEDG AR DMYS+ S+I++ Q GP+T Sbjct: 184 RRNGQRSIFPSRAGTFPKGLCMRYIDPEAVVGCEDGTARVFDMYSKTCSQIIRTQGGPIT 243 Query: 737 CISLSDTQMXXXXXXXXXXTVSDLSSAQRAATLKS-FGSAGISTLC 871 C+SLSD Q+ TVSD Q ATLKS + GI T+C Sbjct: 244 CLSLSDNQLFLSGSSLGRVTVSDPLMDQPVATLKSTITAGGIQTIC 289 >ref|XP_003599502.1| F-box/WD-40 repeat-containing protein [Medicago truncatula] gi|355488550|gb|AES69753.1| F-box/WD-40 repeat-containing protein [Medicago truncatula] Length = 438 Score = 245 bits (625), Expect = 1e-62 Identities = 115/244 (47%), Positives = 164/244 (67%) Frame = +2 Query: 140 CSAVCKSWNCVISTSTLFRNLYYKQKRSQSRNVLEESCCSEKTSKMCLKELALDSHRTSL 319 CS VCK WN ++ + +L ++Y++K + ++K+ +M L+++A++ HR +L Sbjct: 47 CSLVCKFWNEILESRSL--RVFYERKLRNDASSSRSFEHTKKSLRMILRDVAMEQHRLAL 104 Query: 320 QEGSIDIYQWKGHLARVNQCRMKMGLVLTGGDDKVMRLWSVKSYKCLEEYSVPDRARLID 499 Q G + QWKGH ++QCRMKMG ++TG DKV+RLWS+ YKC+EEYS+PD L+D Sbjct: 105 QCGRFHVDQWKGHSTTISQCRMKMGTLVTGVGDKVIRLWSLDRYKCVEEYSIPDTLSLVD 164 Query: 500 FDFDESKIVSLVGASIGIWRRNGKNNIFLSREGEIPKASCMCYVDPEAVVGCEDGRARFL 679 FDFDESKIV L+G+ IWRRNGK ++F S EG+ K SCM Y DPEA+VGC+DG R Sbjct: 165 FDFDESKIVGLIGSHFCIWRRNGKRSVFPSLEGKFIKGSCMRYFDPEAMVGCDDGSVRVF 224 Query: 680 DMYSRKWSKIVKIQDGPVTCISLSDTQMXXXXXXXXXXTVSDLSSAQRAATLKSFGSAGI 859 DMYSR+ S+I+++ P+TC+ LS+ Q+ T++D SS Q+ ATL+S GI Sbjct: 225 DMYSRRCSQIIRMHSAPITCLCLSEDQLILSGSTSGNITIADPSSVQKVATLRSSDFRGI 284 Query: 860 STLC 871 TLC Sbjct: 285 KTLC 288