BLASTX nr result

ID: Cnidium21_contig00033175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033175
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing pro...   124   8e-27
emb|CBI24978.3| unnamed protein product [Vitis vinifera]              124   8e-27
emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]   122   3e-26
ref|XP_002517753.1| F-box and wd40 domain protein, putative [Ric...   112   4e-23
ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21

>ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
           [Vitis vinifera]
          Length = 421

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/106 (56%), Positives = 78/106 (73%)
 Frame = -1

Query: 496 NVIYSMNHLRDHTSTLVMGGIDGVLRIVDEISGKVLSSCILNQITSGSIHAEASNKLSRK 317
           NVIYSM HL   T TLV GGIDGVLRI+D+ +GKV+S C+++   + +   +  + + RK
Sbjct: 308 NVIYSMQHLCSDTHTLVAGGIDGVLRILDQNTGKVVSGCVMDDSPAPTSSQKTDSIIERK 367

Query: 316 KGRRIAEDTRLELMPKASRPSINSLAVGFQKVVTTHDDNYIRVWKF 179
           KGRRI EDT ++ +PK+SRP I  LAVG QKVVTTH+  YIR+WKF
Sbjct: 368 KGRRITEDTLIDSIPKSSRPPITCLAVGMQKVVTTHNGKYIRMWKF 413


>emb|CBI24978.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/106 (56%), Positives = 78/106 (73%)
 Frame = -1

Query: 496 NVIYSMNHLRDHTSTLVMGGIDGVLRIVDEISGKVLSSCILNQITSGSIHAEASNKLSRK 317
           NVIYSM HL   T TLV GGIDGVLRI+D+ +GKV+S C+++   + +   +  + + RK
Sbjct: 322 NVIYSMQHLCSDTHTLVAGGIDGVLRILDQNTGKVVSGCVMDDSPAPTSSQKTDSIIERK 381

Query: 316 KGRRIAEDTRLELMPKASRPSINSLAVGFQKVVTTHDDNYIRVWKF 179
           KGRRI EDT ++ +PK+SRP I  LAVG QKVVTTH+  YIR+WKF
Sbjct: 382 KGRRITEDTLIDSIPKSSRPPITCLAVGMQKVVTTHNGKYIRMWKF 427


>emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]
          Length = 471

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/106 (55%), Positives = 77/106 (72%)
 Frame = -1

Query: 496 NVIYSMNHLRDHTSTLVMGGIDGVLRIVDEISGKVLSSCILNQITSGSIHAEASNKLSRK 317
           N IYSM HL   T TLV GGIDGVLRI+D+ +GKV+S C+++   + +   +  + + RK
Sbjct: 358 NXIYSMQHLCSDTHTLVAGGIDGVLRILDQNTGKVVSGCVMDDSPAPTSSQKTDSIIERK 417

Query: 316 KGRRIAEDTRLELMPKASRPSINSLAVGFQKVVTTHDDNYIRVWKF 179
           KGRRI EDT ++ +PK+SRP I  LAVG QKVVTTH+  YIR+WKF
Sbjct: 418 KGRRITEDTLIDSIPKSSRPPITCLAVGMQKVVTTHNGKYIRMWKF 463


>ref|XP_002517753.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223543025|gb|EEF44560.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 336

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/107 (48%), Positives = 77/107 (71%)
 Frame = -1

Query: 496 NVIYSMNHLRDHTSTLVMGGIDGVLRIVDEISGKVLSSCILNQITSGSIHAEASNKLSRK 317
           NV+YS+ HL +  S+LV+GGIDGVLRI+D+ SG +LSS +++     S    +   + R+
Sbjct: 229 NVVYSLQHLSNDKSSLVVGGIDGVLRILDQNSGIILSSYVIDHDAGSSSSGYSHGTIERR 288

Query: 316 KGRRIAEDTRLELMPKASRPSINSLAVGFQKVVTTHDDNYIRVWKFR 176
           KG+ +  +T ++ +P++SRPSI  LAVG +KVVTTH+  YIRVWKF+
Sbjct: 289 KGKSLPSETIIDQIPRSSRPSITCLAVGMKKVVTTHNSKYIRVWKFK 335


>ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|222850467|gb|EEE88014.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/106 (50%), Positives = 74/106 (69%)
 Frame = -1

Query: 496 NVIYSMNHLRDHTSTLVMGGIDGVLRIVDEISGKVLSSCILNQITSGSIHAEASNKLSRK 317
           NV+YS+ H+R  TSTLV+GGIDGVLR++D+ +G+VLSS +++  TS S        + RK
Sbjct: 333 NVVYSLQHMRSDTSTLVVGGIDGVLRVLDQNTGEVLSSYVMDHGTSTS-SGYTHGVIERK 391

Query: 316 KGRRIAEDTRLELMPKASRPSINSLAVGFQKVVTTHDDNYIRVWKF 179
            G+R+  D  ++ +PK  RP I  LAVG QKV+TTH+   IR+WKF
Sbjct: 392 IGKRLPYDYNIDRIPKTVRPPITCLAVGMQKVITTHNIKNIRMWKF 437


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