BLASTX nr result

ID: Cnidium21_contig00033160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033160
         (802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]   135   3e-34
ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent hel...   135   3e-34
ref|XP_003547681.1| PREDICTED: uncharacterized ATP-dependent hel...   127   6e-32
ref|XP_003627257.1| Helicase sen1 [Medicago truncatula] gi|35552...   134   3e-31
ref|XP_004171521.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   130   3e-31

>emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]
          Length = 1408

 Score =  135 bits (341), Expect(2) = 3e-34
 Identities = 92/232 (39%), Positives = 130/232 (56%), Gaps = 15/232 (6%)
 Frame = +2

Query: 146 PCREDEENNSFFCFQPQPAVPSSSAHTSDVFTASSSSQIIVNNHAFSHASSVSGFQPFIR 325
           P  ++EEN+  F FQPQ A+PS ++HT D+F+ SS  Q I+NNHAF+HASSVSGFQPF+R
Sbjct: 15  PAEDEEENDGVFSFQPQKALPSLNSHTPDLFSTSSGPQRILNNHAFTHASSVSGFQPFVR 74

Query: 326 PKGAQAAETGGDQKSLRDMNF-XXXXXXXXNGDE-KTGSHLVSESGDDQ-VEVKEG---- 484
           PKGA  +E   +QK   + N          NGDE   G  LVS   D Q VE +EG    
Sbjct: 75  PKGANVSEEPVEQKRAGNQNSKFASSSNAGNGDETNAGLQLVSSPADAQAVEREEGEWSD 134

Query: 485 ---LADRNGMANERSIPVGNTDVEMKPADEIVNHADSAPIVEKVSC--SAADSIKDKYSN 649
               A+  G ++ +   V  +      ++++  HA S    E +SC     +S K++ ++
Sbjct: 135 DESSANVYGSSSMQEQSVSGSGKAQAMSEQMDYHASSV-AAETLSCDIKVFESTKEENNS 193

Query: 650 TASLALDTDSND--GKHIQNVQTNCKPD-NSTNSQEESASVPKQREIKGVEA 796
            AS+ LD D++D      +N + N K D    + QEE   VPK +E+KGVEA
Sbjct: 194 HASVTLDPDTHDQRSNSSRNSEGNGKGDVGPMDGQEEPGLVPKLKEVKGVEA 245



 Score = 36.2 bits (82), Expect(2) = 3e-34
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +3

Query: 105 MGSRGKPIFDLNEPPA 152
           MGSRG+P+FDLNEPPA
Sbjct: 1   MGSRGRPLFDLNEPPA 16


>ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
           [Vitis vinifera]
          Length = 1375

 Score =  135 bits (341), Expect(2) = 3e-34
 Identities = 92/232 (39%), Positives = 130/232 (56%), Gaps = 15/232 (6%)
 Frame = +2

Query: 146 PCREDEENNSFFCFQPQPAVPSSSAHTSDVFTASSSSQIIVNNHAFSHASSVSGFQPFIR 325
           P  ++EEN+  F FQPQ A+PS ++HT D+F+ SS  Q I+NNHAF+HASSVSGFQPF+R
Sbjct: 15  PAEDEEENDGVFSFQPQKALPSLNSHTPDLFSTSSGPQRILNNHAFTHASSVSGFQPFVR 74

Query: 326 PKGAQAAETGGDQKSLRDMNF-XXXXXXXXNGDE-KTGSHLVSESGDDQ-VEVKEG---- 484
           PKGA  +E   +QK   + N          NGDE   G  LVS   D Q VE +EG    
Sbjct: 75  PKGANVSEEPVEQKRAGNQNSKFASSSNAGNGDETNAGLQLVSSPADAQAVEREEGEWSD 134

Query: 485 ---LADRNGMANERSIPVGNTDVEMKPADEIVNHADSAPIVEKVSC--SAADSIKDKYSN 649
               A+  G ++ +   V  +      ++++  HA S    E +SC     +S K++ ++
Sbjct: 135 DESSANVYGSSSMQEQSVSGSGKAQAMSEQMDYHASSV-AAETLSCDIKVFESTKEENNS 193

Query: 650 TASLALDTDSND--GKHIQNVQTNCKPD-NSTNSQEESASVPKQREIKGVEA 796
            AS+ LD D++D      +N + N K D    + QEE   VPK +E+KGVEA
Sbjct: 194 HASVTLDPDTHDQRSNSSRNSEGNGKGDVGPMDGQEEPGLVPKLKEVKGVEA 245



 Score = 36.2 bits (82), Expect(2) = 3e-34
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +3

Query: 105 MGSRGKPIFDLNEPPA 152
           MGSRG+P+FDLNEPPA
Sbjct: 1   MGSRGRPLFDLNEPPA 16


>ref|XP_003547681.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
           [Glycine max]
          Length = 1328

 Score =  127 bits (320), Expect(2) = 6e-32
 Identities = 79/221 (35%), Positives = 120/221 (54%), Gaps = 4/221 (1%)
 Frame = +2

Query: 146 PCREDEENNSFFCFQPQPAVPSSSAHTSDVFTASSSSQIIVNNHAFSHASSVSGFQPFIR 325
           P  +++E     CFQPQ   PS++ HTSD+F  SS++Q I+NNHAFSHASSVSGFQPF+R
Sbjct: 15  PAEDNDEREGIVCFQPQKTHPSTNPHTSDLFATSSAAQGIINNHAFSHASSVSGFQPFVR 74

Query: 326 PKGAQAAETGGDQKSLRDMNFXXXXXXXXNGDEKTGSHLVSESGDDQVEVKEG--LADRN 499
           PK     E   + K+  D +                      S  D+V V +   L+  N
Sbjct: 75  PKSTGVPELDAESKTAGDQD-------------------AKVSSKDEVRVMDSRILSSAN 115

Query: 500 GMANERSIPVGNTDVEMKPADEIVNHADSAPIVEKVSCSAADSIKDKYSNTASLALDTDS 679
             + ER         E + +DE V     A   +  +  ++DSI D+ S+ AS+ L+++S
Sbjct: 116 AQSTERE--------EGEWSDEEV-----ASDSKSRNIKSSDSINDEKSSHASIGLESNS 162

Query: 680 NDGK--HIQNVQTNCKPDNSTNSQEESASVPKQREIKGVEA 796
           ++ K   I N+++N K + S ++QEE   +PK +E+KG+EA
Sbjct: 163 SEQKSNSIPNLESNIKSEASIDAQEEPPLIPKPKEVKGIEA 203



 Score = 36.2 bits (82), Expect(2) = 6e-32
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +3

Query: 105 MGSRGKPIFDLNEPPA 152
           MGSRG+P+FDLNEPPA
Sbjct: 1   MGSRGRPLFDLNEPPA 16


>ref|XP_003627257.1| Helicase sen1 [Medicago truncatula] gi|355521279|gb|AET01733.1|
           Helicase sen1 [Medicago truncatula]
          Length = 1516

 Score =  134 bits (338), Expect(2) = 3e-31
 Identities = 81/231 (35%), Positives = 128/231 (55%), Gaps = 14/231 (6%)
 Frame = +2

Query: 146 PCREDEENNSFFCFQPQPAVPSSSAHTSDVFTASSSSQIIVNNHAFSHASSVSGFQPFIR 325
           P  +++E +S FCFQPQ   PS+++H+SD+  AS+++Q I+NNHAFSHAS+VSGFQPFIR
Sbjct: 17  PTEDNDEKDSVFCFQPQKTQPSTNSHSSDLLVASTAAQGIMNNHAFSHASTVSGFQPFIR 76

Query: 326 PKGAQAAETGGDQKSLRDMNFXXXXXXXXNGDEKTGSHLVS--------ESGDDQVEVKE 481
            K A       D K+  D           + D K     +S        E  + +    E
Sbjct: 77  SKSASVPGADSDLKNAGDSGAKSSSKFIKDEDVKVKESHISGLTKAQSTEREEGEWSDDE 136

Query: 482 GLADRNGMAN----ERSIPVGNTDVEMKPADEIVNHADSAPIVEKVSCSAADSIKDKYSN 649
           G AD NG  N      +     T V +  +  + + + S+     +  S ++S+ D+ ++
Sbjct: 137 GFADANGGNNPPQQSHAPEEQTTSVAVNGSSAVASDSKSS----NIKSSNSNSLNDEKNS 192

Query: 650 TASLALDTDSNDGKH--IQNVQTNCKPDNSTNSQEESASVPKQREIKGVEA 796
            AS+ L++DS++ K+  I N ++N K + S ++QEE   VPKQ+E+KG+EA
Sbjct: 193 RASIGLESDSSEQKNNGIPNSESNVKSEASIDAQEEPGLVPKQKEVKGIEA 243



 Score = 26.9 bits (58), Expect(2) = 3e-31
 Identities = 12/17 (70%), Positives = 14/17 (82%), Gaps = 2/17 (11%)
 Frame = +3

Query: 105 MGSRGKPI--FDLNEPP 149
           MGS G+P+  FDLNEPP
Sbjct: 1   MGSGGRPLFDFDLNEPP 17


>ref|XP_004171521.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized ATP-dependent
           helicase C29A10.10c-like [Cucumis sativus]
          Length = 1363

 Score =  130 bits (328), Expect(2) = 3e-31
 Identities = 91/224 (40%), Positives = 121/224 (54%), Gaps = 7/224 (3%)
 Frame = +2

Query: 146 PCREDEENNSFFCFQPQPAVPSSSAHTSDVFTASSSSQIIVNNHAFSHASSVSGFQPFIR 325
           P  ED E++    FQPQ A P S++H SD+F AS  SQ ++NNHAFSHASSVSGFQPF+R
Sbjct: 14  PPVEDNEDSDGLVFQPQKAQPPSNSHASDLFPASGGSQRLLNNHAFSHASSVSGFQPFVR 73

Query: 326 PKGAQAAETGGDQKSLRDMNFXXXXXXXXNGDEKTGSHLVSESGDDQ-VEVKEG-LADRN 499
            K     E G +QK + D N         +  E     LVS   D Q VE +EG  +D  
Sbjct: 74  SKLGSNTEIGEEQKKILDQNSRTTLSSKLSNVETAAPALVSGPRDTQSVEREEGEWSDAE 133

Query: 500 GMANERSIPVGNTDVEMKPADEIVNHADSAPIVEKVSCS--AADSIKDKYSNTASLALDT 673
           G A+     V     ++K + E    + S    E   C+   +DS  DK +N      D 
Sbjct: 134 GSADINGGSV--LHKQLKTSQEKGLLSPSRDFSENNLCNLKISDSTLDKSNNHVPSTSDP 191

Query: 674 DSNDGK--HIQNVQTNCKPDNSTNS-QEESASVPKQREIKGVEA 796
           + ND K   I N ++N K D ST++ QEE+  +PKQRE+KG+EA
Sbjct: 192 EPNDRKSNSILNTESNVKLDTSTDTVQEETGLLPKQREVKGIEA 235



 Score = 30.8 bits (68), Expect(2) = 3e-31
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 105 MGSRGKPIFDLNEPP 149
           MGSRG+ +FDLNEPP
Sbjct: 1   MGSRGRLLFDLNEPP 15


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