BLASTX nr result

ID: Cnidium21_contig00033090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033090
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271391.2| PREDICTED: protein SPA1-RELATED 2-like, part...    78   9e-13
ref|XP_002509925.1| ubiquitin ligase protein cop1, putative [Ric...    72   5e-11
ref|XP_003538679.1| PREDICTED: protein SPA1-RELATED 2-like [Glyc...    70   2e-10
ref|XP_003516717.1| PREDICTED: protein SPA1-RELATED 2-like [Glyc...    66   5e-09
emb|CBI34453.3| unnamed protein product [Vitis vinifera]               63   3e-08

>ref|XP_002271391.2| PREDICTED: protein SPA1-RELATED 2-like, partial [Vitis vinifera]
          Length = 1054

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
 Frame = -3

Query: 538 EELTLRDCSSEKLDAES-NLSRDRLQTRQSRWHH--LLGGSGYRGSQTRVMNALEDAGCT 368
           EELTLR+ +   L     + +RDR+Q RQ++W H  LL G                    
Sbjct: 98  EELTLRNYNGANLAVVGPSNNRDRMQIRQNQWQHIHLLAG-------------------- 137

Query: 367 SKSELDRKSPNNHGSGDASFLVDAAVRFDIEEMSNVREDLGSTIKSEILDRDAPNNNCNE 188
                        G G  S + D+  R + + MS+  ED+G +   E L +   +++ NE
Sbjct: 138 -------------GQGTGSSVRDSVRRDNGQPMSSAWEDVGYSSFPEFLAQKQSSHDHNE 184

Query: 187 VGETRNQV---AXXXXXXXXXXMRTKILSRSGFTQYFVKDTLKGKGVVCRGPAP---RVE 26
           V E        A          +RTKILS+SGF+++F+K++LKGKGV+CRGPA     VE
Sbjct: 185 VREQVTNCENRAVSGDTLSPGGIRTKILSKSGFSEFFIKNSLKGKGVICRGPARDGFGVE 244

Query: 25  FRDPSFPK 2
            RD +  K
Sbjct: 245 IRDSNITK 252


>ref|XP_002509925.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
           gi|223549824|gb|EEF51312.1| ubiquitin ligase protein
           cop1, putative [Ricinus communis]
          Length = 1044

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 57/172 (33%), Positives = 75/172 (43%), Gaps = 6/172 (3%)
 Frame = -3

Query: 538 EELTLRDCSSEKLDAESNLS-RDRLQTRQSRWHHL--LGGSGYRGSQTRVMNALEDAGCT 368
           EELT+R+  S  L      + R+R+QTRQ +W HL  LGG+   GS            CT
Sbjct: 96  EELTVRNYDSSNLAIVGTSNFRERIQTRQGQWQHLYQLGGASGIGSS-----------CT 144

Query: 367 SKSELDRKSPNNHGSGDASFLVDAAVRFDIEEMSNVREDLGSTIKSEILDRDAPNNNCNE 188
                D                        +EMS+  ED         L     +++CNE
Sbjct: 145 KTLYRDNG----------------------QEMSSPLEDARYASSPVFLSHKTSSDDCNE 182

Query: 187 VGE---TRNQVAXXXXXXXXXXMRTKILSRSGFTQYFVKDTLKGKGVVCRGP 41
           V E                   +RTKILS+SGF++YFVK TLKGKG++ RGP
Sbjct: 183 VVEQSANAKNKGLSQNMISHGGIRTKILSKSGFSEYFVKSTLKGKGIIFRGP 234


>ref|XP_003538679.1| PREDICTED: protein SPA1-RELATED 2-like [Glycine max]
          Length = 1103

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
 Frame = -3

Query: 556 DNEDTFEELTLRDCSSEKLDAESNLSRDRLQTRQSRWHHLLGGSGYRGSQTRVMNALEDA 377
           D +   EELT++  +   LD  ++ +R+++  +Q+ W +L                    
Sbjct: 81  DADAMIEELTVKSYNGSSLDIGTSNNREQMYNQQNHWQNLY------------------- 121

Query: 376 GCTSKSELDRKSPNNHGSGDASFLVDAAVRFDIEEMSNVREDLGSTIKSEILDR----DA 209
                     +  +N G G++  L D   R  ++  S+ RED+GS+   E+L R    D 
Sbjct: 122 ----------QLASNSGIGNS--LSDIGTRNSVQATSSAREDIGSSSFPEMLARKSLSDG 169

Query: 208 PNNNCNEVGETRNQVAXXXXXXXXXXMRTKILSRSGFTQYFVKDTLKGKGVVCRGPA 38
            +N    +    N+             RTKI+S+SGF ++F+K+TL+GKG+V RGP+
Sbjct: 170 QSNAMEHLASAENK---GGAGDVHQGTRTKIISQSGFAEFFIKNTLRGKGIVYRGPS 223


>ref|XP_003516717.1| PREDICTED: protein SPA1-RELATED 2-like [Glycine max]
          Length = 1129

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
 Frame = -3

Query: 556 DNEDTFEELTLRDCSSEKLDAESNLSRDRLQTRQSRWHHLLGGSGYRGSQTRVMNALEDA 377
           D +   EELT++  +   LD  ++ +R+++  RQ+ W +L                    
Sbjct: 85  DADVMVEELTVKSYNGSSLDIGTSNNREQIYNRQNHWQNLY------------------- 125

Query: 376 GCTSKSELDRKSPNNHGSGDASFLVDAAVRFDIEEMSNVREDLGSTIKSEILDR----DA 209
                     +  +N G G++  L D   R  +   S+ RED+GS+   E+L R    D 
Sbjct: 126 ----------QLASNSGIGNS--LSDIGTRNSVPATSSAREDIGSSSFPEMLARKSLSDG 173

Query: 208 PNNNCNEVGETRNQVAXXXXXXXXXXMRTKILSRSGFTQYFVKDTLKGKGVVCRGPA 38
            +N    +    N+             R KI+S+SGF ++F+K+TL+GKG+V +GP+
Sbjct: 174 QSNVMEHLASAENK---EGAGDVRQGTRKKIISQSGFAEFFIKNTLRGKGIVYKGPS 227


>emb|CBI34453.3| unnamed protein product [Vitis vinifera]
          Length = 799

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
 Frame = -3

Query: 271 MSNVREDLGSTIKSEILDRDAPNNNCNEVGETRNQV---AXXXXXXXXXXMRTKILSRSG 101
           MS+  ED+G +   E L +   +++ NEV E        A          +RTKILS+SG
Sbjct: 1   MSSAWEDVGYSSFPEFLAQKQSSHDHNEVREQVTNCENRAVSGDTLSPGGIRTKILSKSG 60

Query: 100 FTQYFVKDTLKGKGVVCRGPAP---RVEFRDPSFPK 2
           F+++F+K++LKGKGV+CRGPA     VE RD +  K
Sbjct: 61  FSEFFIKNSLKGKGVICRGPARDGFGVEIRDSNITK 96


Top