BLASTX nr result
ID: Cnidium21_contig00033083
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00033083 (937 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI33284.3| unnamed protein product [Vitis vinifera] 251 2e-64 ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 251 2e-64 ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s... 251 2e-64 ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 246 4e-63 ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 240 3e-61 >emb|CBI33284.3| unnamed protein product [Vitis vinifera] Length = 300 Score = 251 bits (640), Expect = 2e-64 Identities = 127/240 (52%), Positives = 166/240 (69%), Gaps = 3/240 (1%) Frame = +1 Query: 136 MSRLQDSMALKRKRGGQSSVT--LGDVDRNILSTVQGKEDLGISIAELRRVSKLPANQLN 309 MSR Q S +LKRKR ++ + L D +R + ++ KED+GI +++R + LP N + Sbjct: 62 MSRSQGS-SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 120 Query: 310 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKGTC 489 K++K L +LIKEV NI+ KG KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC Sbjct: 121 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 180 Query: 490 KKIIGKLKVATAKGVHXXXXXXXXXXXXVSSEQILQILKSMVLDNEILEVKSNGLAEYHS 669 +++ KLKVATA+G+ S++QI +IL+++VLDNEI+EV+S+G E+ S Sbjct: 181 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 240 Query: 670 IPVGEICYRCAPGGGLGEVSET-GTMVSIPCGVCPRINICTPDGVISPTTCVYYTKWLDF 846 IP+G +CYRC GGLG T G M SIPCGVCPRI CTPDG+ISP TC YYTKWLDF Sbjct: 241 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 300 >ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis vinifera] Length = 239 Score = 251 bits (640), Expect = 2e-64 Identities = 127/240 (52%), Positives = 166/240 (69%), Gaps = 3/240 (1%) Frame = +1 Query: 136 MSRLQDSMALKRKRGGQSSVT--LGDVDRNILSTVQGKEDLGISIAELRRVSKLPANQLN 309 MSR Q S +LKRKR ++ + L D +R + ++ KED+GI +++R + LP N + Sbjct: 1 MSRSQGS-SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59 Query: 310 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKGTC 489 K++K L +LIKEV NI+ KG KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC Sbjct: 60 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119 Query: 490 KKIIGKLKVATAKGVHXXXXXXXXXXXXVSSEQILQILKSMVLDNEILEVKSNGLAEYHS 669 +++ KLKVATA+G+ S++QI +IL+++VLDNEI+EV+S+G E+ S Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179 Query: 670 IPVGEICYRCAPGGGLGEVSET-GTMVSIPCGVCPRINICTPDGVISPTTCVYYTKWLDF 846 IP+G +CYRC GGLG T G M SIPCGVCPRI CTPDG+ISP TC YYTKWLDF Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239 >ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis vinifera] Length = 239 Score = 251 bits (640), Expect = 2e-64 Identities = 127/240 (52%), Positives = 166/240 (69%), Gaps = 3/240 (1%) Frame = +1 Query: 136 MSRLQDSMALKRKRGGQSSVT--LGDVDRNILSTVQGKEDLGISIAELRRVSKLPANQLN 309 MSR Q S +LKRKR ++ + L D +R + ++ KED+GI +++R + LP N + Sbjct: 1 MSRSQGS-SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59 Query: 310 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKGTC 489 K++K L +LIKEV NI+ KG KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC Sbjct: 60 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 119 Query: 490 KKIIGKLKVATAKGVHXXXXXXXXXXXXVSSEQILQILKSMVLDNEILEVKSNGLAEYHS 669 +++ KLKVATA+G+ S++QI +IL+++VLDNEI+EV+S+G E+ S Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179 Query: 670 IPVGEICYRCAPGGGLGEVSET-GTMVSIPCGVCPRINICTPDGVISPTTCVYYTKWLDF 846 IP+G +CYRC GGLG T G M SIPCGVCPRI CTPDG+ISP TC YYTKWLDF Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239 >ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis vinifera] Length = 239 Score = 246 bits (629), Expect = 4e-63 Identities = 124/240 (51%), Positives = 165/240 (68%), Gaps = 3/240 (1%) Frame = +1 Query: 136 MSRLQDSMALKRKRGGQSSVT--LGDVDRNILSTVQGKEDLGISIAELRRVSKLPANQLN 309 MSR Q ++LKRKR ++ + L D +R + ++ KED+GI +++R + LP N + Sbjct: 1 MSRSQ-GLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59 Query: 310 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKGTC 489 K++K L +LIKEV NI+ KG KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC Sbjct: 60 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119 Query: 490 KKIIGKLKVATAKGVHXXXXXXXXXXXXVSSEQILQILKSMVLDNEILEVKSNGLAEYHS 669 K++ KLKVATA+G+ S++QI +IL+++VLDNEI+EV+S+G E+ S Sbjct: 120 VKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179 Query: 670 IPVGEICYRCAPGGGLGEVS-ETGTMVSIPCGVCPRINICTPDGVISPTTCVYYTKWLDF 846 IP+G +CYRC GGLG + G M SIPCGVCPRI CTPDG+ISP +C YY KWLDF Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWLDF 239 >ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Glycine max] Length = 239 Score = 240 bits (613), Expect = 3e-61 Identities = 122/239 (51%), Positives = 160/239 (66%), Gaps = 2/239 (0%) Frame = +1 Query: 136 MSRLQDSMALKRKRGGQSSVT--LGDVDRNILSTVQGKEDLGISIAELRRVSKLPANQLN 309 MS LQ S +LKRKR + VT L D +R + + + K+D+GI +++R + LP + + Sbjct: 1 MSHLQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60 Query: 310 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKGTC 489 K++K L + LIKEV NI+ KG KHYMAAEFEPSKE+TGG WY G+L+ + I +K C Sbjct: 61 KSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVC 120 Query: 490 KKIIGKLKVATAKGVHXXXXXXXXXXXXVSSEQILQILKSMVLDNEILEVKSNGLAEYHS 669 K I + KVAT GV V+++QI +IL+++VLD+EI+EVKS G ++ S Sbjct: 121 LKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSS 180 Query: 670 IPVGEICYRCAPGGGLGEVSETGTMVSIPCGVCPRINICTPDGVISPTTCVYYTKWLDF 846 +PVG ICYRC GG + G M SIPCGVCPRIN CTPDG+ISP TCVYY KWLDF Sbjct: 181 VPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239