BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033083
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33284.3| unnamed protein product [Vitis vinifera]              251   2e-64
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   251   2e-64
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s...   251   2e-64
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s...   246   4e-63
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s...   240   3e-61

>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  251 bits (640), Expect = 2e-64
 Identities = 127/240 (52%), Positives = 166/240 (69%), Gaps = 3/240 (1%)
 Frame = +1

Query: 136 MSRLQDSMALKRKRGGQSSVT--LGDVDRNILSTVQGKEDLGISIAELRRVSKLPANQLN 309
           MSR Q S +LKRKR   ++ +  L D +R +   ++ KED+GI   +++R + LP N + 
Sbjct: 62  MSRSQGS-SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 120

Query: 310 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKGTC 489
           K++K L   +LIKEV NI+ KG KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC
Sbjct: 121 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 180

Query: 490 KKIIGKLKVATAKGVHXXXXXXXXXXXXVSSEQILQILKSMVLDNEILEVKSNGLAEYHS 669
            +++ KLKVATA+G+              S++QI +IL+++VLDNEI+EV+S+G  E+ S
Sbjct: 181 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 240

Query: 670 IPVGEICYRCAPGGGLGEVSET-GTMVSIPCGVCPRINICTPDGVISPTTCVYYTKWLDF 846
           IP+G +CYRC   GGLG    T G M SIPCGVCPRI  CTPDG+ISP TC YYTKWLDF
Sbjct: 241 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 300


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  251 bits (640), Expect = 2e-64
 Identities = 127/240 (52%), Positives = 166/240 (69%), Gaps = 3/240 (1%)
 Frame = +1

Query: 136 MSRLQDSMALKRKRGGQSSVT--LGDVDRNILSTVQGKEDLGISIAELRRVSKLPANQLN 309
           MSR Q S +LKRKR   ++ +  L D +R +   ++ KED+GI   +++R + LP N + 
Sbjct: 1   MSRSQGS-SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59

Query: 310 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKGTC 489
           K++K L   +LIKEV NI+ KG KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC
Sbjct: 60  KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119

Query: 490 KKIIGKLKVATAKGVHXXXXXXXXXXXXVSSEQILQILKSMVLDNEILEVKSNGLAEYHS 669
            +++ KLKVATA+G+              S++QI +IL+++VLDNEI+EV+S+G  E+ S
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179

Query: 670 IPVGEICYRCAPGGGLGEVSET-GTMVSIPCGVCPRINICTPDGVISPTTCVYYTKWLDF 846
           IP+G +CYRC   GGLG    T G M SIPCGVCPRI  CTPDG+ISP TC YYTKWLDF
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239


>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  251 bits (640), Expect = 2e-64
 Identities = 127/240 (52%), Positives = 166/240 (69%), Gaps = 3/240 (1%)
 Frame = +1

Query: 136 MSRLQDSMALKRKRGGQSSVT--LGDVDRNILSTVQGKEDLGISIAELRRVSKLPANQLN 309
           MSR Q S +LKRKR   ++ +  L D +R +   ++ KED+GI   +++R + LP N + 
Sbjct: 1   MSRSQGS-SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59

Query: 310 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKGTC 489
           K++K L   +LIKEV NI+ KG KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC
Sbjct: 60  KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 119

Query: 490 KKIIGKLKVATAKGVHXXXXXXXXXXXXVSSEQILQILKSMVLDNEILEVKSNGLAEYHS 669
            +++ KLKVATA+G+              S++QI +IL+++VLDNEI+EV+S+G  E+ S
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179

Query: 670 IPVGEICYRCAPGGGLGEVSET-GTMVSIPCGVCPRINICTPDGVISPTTCVYYTKWLDF 846
           IP+G +CYRC   GGLG    T G M SIPCGVCPRI  CTPDG+ISP TC YYTKWLDF
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239


>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  246 bits (629), Expect = 4e-63
 Identities = 124/240 (51%), Positives = 165/240 (68%), Gaps = 3/240 (1%)
 Frame = +1

Query: 136 MSRLQDSMALKRKRGGQSSVT--LGDVDRNILSTVQGKEDLGISIAELRRVSKLPANQLN 309
           MSR Q  ++LKRKR   ++ +  L D +R +   ++ KED+GI   +++R + LP N + 
Sbjct: 1   MSRSQ-GLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59

Query: 310 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKGTC 489
           K++K L   +LIKEV NI+ KG KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC
Sbjct: 60  KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119

Query: 490 KKIIGKLKVATAKGVHXXXXXXXXXXXXVSSEQILQILKSMVLDNEILEVKSNGLAEYHS 669
            K++ KLKVATA+G+              S++QI +IL+++VLDNEI+EV+S+G  E+ S
Sbjct: 120 VKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179

Query: 670 IPVGEICYRCAPGGGLGEVS-ETGTMVSIPCGVCPRINICTPDGVISPTTCVYYTKWLDF 846
           IP+G +CYRC   GGLG    + G M SIPCGVCPRI  CTPDG+ISP +C YY KWLDF
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWLDF 239


>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max]
          Length = 239

 Score =  240 bits (613), Expect = 3e-61
 Identities = 122/239 (51%), Positives = 160/239 (66%), Gaps = 2/239 (0%)
 Frame = +1

Query: 136 MSRLQDSMALKRKRGGQSSVT--LGDVDRNILSTVQGKEDLGISIAELRRVSKLPANQLN 309
           MS LQ S +LKRKR   + VT  L D +R + + +  K+D+GI   +++R + LP + + 
Sbjct: 1   MSHLQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60

Query: 310 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKGTC 489
           K++K L +  LIKEV NI+ KG KHYMAAEFEPSKE+TGG WY  G+L+ + I  +K  C
Sbjct: 61  KSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVC 120

Query: 490 KKIIGKLKVATAKGVHXXXXXXXXXXXXVSSEQILQILKSMVLDNEILEVKSNGLAEYHS 669
            K I + KVAT  GV             V+++QI +IL+++VLD+EI+EVKS G  ++ S
Sbjct: 121 LKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSS 180

Query: 670 IPVGEICYRCAPGGGLGEVSETGTMVSIPCGVCPRINICTPDGVISPTTCVYYTKWLDF 846
           +PVG ICYRC   GG     + G M SIPCGVCPRIN CTPDG+ISP TCVYY KWLDF
Sbjct: 181 VPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239