BLASTX nr result

ID: Cnidium21_contig00033078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033078
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX96367.1| transposon protein, putative, CACTA, En/Spm sub-c...    54   1e-05

>gb|AAX96367.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group] gi|77549130|gb|ABA91927.1| transposon
           protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 922

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 25/67 (37%), Positives = 41/67 (61%)
 Frame = -3

Query: 203 MEAGAKSWRDFKVNLVRYFLRTGRNPCETYSYISEDDWETFKKIHETDEFKEISEKAKES 24
           ++  AKSWR +K+ L + F++TGR P  TY+ I+ + W+ F  + ++ E  + S+K  E 
Sbjct: 179 LQTMAKSWRGWKITLNKKFVKTGRTPFSTYANITPNQWDDFLTLKKSPEEIKRSQKYSEL 238

Query: 23  QKHNKDP 3
            K NK P
Sbjct: 239 AKKNKFP 245


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