BLASTX nr result

ID: Cnidium21_contig00033047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033047
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93628.1| unknown [Populus trichocarpa]                           55   8e-06

>gb|ABK93628.1| unknown [Populus trichocarpa]
          Length = 116

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
 Frame = -3

Query: 517 SMNAAAATSPAQFYLPGRRPMRDLRILHTSQL------DADQKIKVLPKETIIDTIQPDT 356
           S N  + +SP+ F+L GRR MR+ R +   ++      D  +  KVL ++T   TI+ D+
Sbjct: 20  SQNICSTSSPSMFFLTGRRSMREQRSMREQRMSSVTLRDEHENTKVLDEKTEQATIKEDS 79

Query: 355 S----PKESASIDDERELVYHIDYHGV 287
                P  + ++DD   LVYH+DYHGV
Sbjct: 80  RQLAYPSSTDNLDD---LVYHVDYHGV 103


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