BLASTX nr result

ID: Cnidium21_contig00033045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033045
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143441.1| PREDICTED: DUF246 domain-containing protein ...    55   6e-06
gb|AFK40388.1| unknown [Lotus japonicus]                               55   8e-06

>ref|XP_004143441.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus] gi|449499794|ref|XP_004160919.1| PREDICTED:
           DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 513

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 6/55 (10%)
 Frame = +3

Query: 123 NQGGVIAIVFVLLT------LFTPFSHASSSFLPEFNAIKPRHLNLLRSAVQRQT 269
           N+ G +A VFVLL       LF+PF HAS S   E+N  KPRHL LL+SA+QRQ+
Sbjct: 10  NRAGALAGVFVLLFPVFLPGLFSPFGHASPSTFSEWNTPKPRHLRLLKSALQRQS 64


>gb|AFK40388.1| unknown [Lotus japonicus]
          Length = 502

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/55 (58%), Positives = 36/55 (65%)
 Frame = +3

Query: 105 MMLLHYNQGGVIAIVFVLLTLFTPFSHASSSFLPEFNAIKPRHLNLLRSAVQRQT 269
           M L ++N      + F LL  FT FSHASS F PE N IKPRH  LLRSAVQR+T
Sbjct: 1   MELGNHNHAAATLVTFCLLFSFT-FSHASS-FYPELNPIKPRHSRLLRSAVQRET 53


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