BLASTX nr result

ID: Cnidium21_contig00033031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033031
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26124.3| unnamed protein product [Vitis vinifera]              165   2e-38
emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera]   160   4e-37
ref|XP_002516857.1| conserved hypothetical protein [Ricinus comm...   157   4e-36
ref|XP_002311806.1| hypothetical protein POPTRDRAFT_766749 [Popu...   134   4e-29
ref|XP_002311805.1| chromatin remodeling complex subunit [Populu...   134   4e-29

>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
          Length = 2266

 Score =  165 bits (417), Expect = 2e-38
 Identities = 115/308 (37%), Positives = 159/308 (51%), Gaps = 56/308 (18%)
 Frame = -1

Query: 817  AGAAGPGYGMAIGTSGAYATTVPGLPGSVHYS-NTYDTSSLGPKMNKDRNMEPFSSVSS- 644
            +GAA   +G   G   +Y    PG   S+ +S ++YD  +L  KM+K+RNME FS+++S 
Sbjct: 240  SGAAAKIHG---GMPSSYPVVEPGFSSSMQFSGSSYDNHALVAKMHKERNMEAFSAMNSS 296

Query: 643  -LDHPSDKGA-----------------------------------------FGKASEYEG 590
             L+  S K A                                          GK  ++EG
Sbjct: 297  LLEASSGKNAVDAEQWKHGLMRSAVIGAPEKTIEAQMLSGNHGEEESKTLSIGKVLDHEG 356

Query: 589  GSIHTSGNESSLVQGGMLNNVTEMAVLRST-----GKLPVSQSPSAPIMVFKEQHLKQLR 425
            G+ +TSGN + + QGG  N VTEM++LRS      GK P+ Q+     M FKEQHLKQLR
Sbjct: 357  GTSNTSGNANKMAQGGGANMVTEMSMLRSATFRDAGKSPIPQALPFSGMPFKEQHLKQLR 416

Query: 424  AQCLVYLAFRNGLKPKKLHLDFALGNVFPKE----EGPSKDMIEQKGKEQLFDGTSNASD 257
            AQCLV+LA RN L PKKLHL+ ALGN++PKE    +GP K++I+ KGK+   +  SN  +
Sbjct: 417  AQCLVFLAIRNNLMPKKLHLEIALGNIYPKEGGITDGPRKELIDHKGKDYSLNEPSNVPE 476

Query: 256  --VPFGRLENSRESDNLRLDPSSVGMLADVKLTKGEYMNMPGEK-NCMPSGLAEYVVKSG 86
              VPFGRL N R+++ +    SS G L +      + M+  GE    M   L     +  
Sbjct: 477  VPVPFGRLSNVRDTERIPPGSSSSGSLLET-----DSMSKAGENTKIMEDNLTGIAEERR 531

Query: 85   QIMMERRK 62
             I+  RRK
Sbjct: 532  HILAMRRK 539


>emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera]
          Length = 771

 Score =  160 bits (405), Expect = 4e-37
 Identities = 106/274 (38%), Positives = 147/274 (53%), Gaps = 55/274 (20%)
 Frame = -1

Query: 868  FNTSGGNLSGETLLQQSAGAAGPGYGMAIGTSGAYATTVPGLPGSVHYS-NTYDTSSLGP 692
            F  S G++      +Q  GAA   +G   G   +Y    PG   S+ +S ++YD  +L  
Sbjct: 258  FPISSGSMRSMLRAKQE-GAAAKIHG---GMPSSYPVVEPGFSSSMQFSGSSYDNHALVA 313

Query: 691  KMNKDRNMEPFSSVSS--LDHPSDKGA--------------------------------- 617
            KM+K+RNME FS+++S  L+  S K A                                 
Sbjct: 314  KMHKERNMEAFSAMNSSLLEASSGKNAVDAEQWKHGLMRSAVIGAPEKTIEAQMLSGNHG 373

Query: 616  --------FGKASEYEGGSIHTSGNESSLVQGGMLNNVTEMAVLRST-----GKLPVSQS 476
                     GK  ++EGG+ +TSGN + + QGG  N VTEM++LRS      GK P+ Q+
Sbjct: 374  EEESKTLSIGKVLDHEGGTSNTSGNANKMAQGGGANMVTEMSMLRSATFRDAGKSPIPQA 433

Query: 475  PSAPIMVFKEQHLKQLRAQCLVYLAFRNGLKPKKLHLDFALGNVFPKE----EGPSKDMI 308
                 M FKEQHLKQLRAQCLV+LA RN L PKKLHL+ ALGN++PKE    +GP K++I
Sbjct: 434  LPFSGMPFKEQHLKQLRAQCLVFLAIRNNLMPKKLHLEIALGNIYPKEGGITDGPRKELI 493

Query: 307  EQKGKEQLFDGTSNASD--VPFGRLENSRESDNL 212
            + KGK+   +  SN  +  VPFGRL N R+++ +
Sbjct: 494  DHKGKDYSLNEPSNVPEVPVPFGRLSNVRDTERI 527


>ref|XP_002516857.1| conserved hypothetical protein [Ricinus communis]
            gi|223543945|gb|EEF45471.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 3502

 Score =  157 bits (396), Expect = 4e-36
 Identities = 113/302 (37%), Positives = 162/302 (53%), Gaps = 23/302 (7%)
 Frame = -1

Query: 901  PFEKSQVPRFSFNTSGGNLSGETLLQQ---SAGAAGP----GYGMAIGTSGAYATTVPGL 743
            P E+SQVPRFS N+  GN+  E  LQQ   S+  AGP      GM I  S +Y+    G 
Sbjct: 279  PLERSQVPRFSSNSLSGNMMAEVPLQQPTTSSLGAGPISKVHGGMPI-ISSSYSMGELGF 337

Query: 742  PGSVHYSNT----YDTSSLGPKMNKDRNMEP-FSSVSSLDHPSDKGAFGKASEYEGGSIH 578
             G V + ++    +  +        ++ ME  FS  + +D      + G+  E +GGS +
Sbjct: 338  SGQVPFGSSEFLKHGLAKGSVSSPSEKTMEAHFSPTNRVDDLPPSLSTGRM-ENDGGSSN 396

Query: 577  TSGNESSLVQGGMLNNVTEMAVLRST-----GKLPVSQSPSAPIMVFKEQHLKQLRAQCL 413
               + + ++QGG  NN +EM +LR T     GK  VSQ P  P   FK+Q LKQLRAQCL
Sbjct: 397  IFADANKIIQGGRQNNNSEMTMLRGTTPRDMGKFVVSQ-PGNP---FKDQQLKQLRAQCL 452

Query: 412  VYLAFRNGLKPKKLHLDFALGNVFPKE----EGPSKDMIEQKGKEQ--LFDGTSNASDVP 251
            V+LAFRNGL PKKLHL+ ALGN+FPK+    EGP +++I+ +GK Q  L   +     +P
Sbjct: 453  VFLAFRNGLVPKKLHLELALGNIFPKDGSNSEGPRRELIDHRGKAQSPLEPTSIPEVSMP 512

Query: 250  FGRLENSRESDNLRLDPSSVGMLADVKLTKGEYMNMPGEKNCMPSGLAEYVVKSGQIMME 71
            FGRL N++ESD +    S  G   D      E      ++N  P+ ++ ++ +   +   
Sbjct: 513  FGRLNNAKESDGVSPGTSCTGRFLDGNSLSKECDKKMEDRNAQPTDVSVHMDEKKHLFAT 572

Query: 70   RR 65
            RR
Sbjct: 573  RR 574


>ref|XP_002311806.1| hypothetical protein POPTRDRAFT_766749 [Populus trichocarpa]
           gi|222851626|gb|EEE89173.1| hypothetical protein
           POPTRDRAFT_766749 [Populus trichocarpa]
          Length = 539

 Score =  134 bits (336), Expect = 4e-29
 Identities = 95/254 (37%), Positives = 132/254 (51%), Gaps = 24/254 (9%)
 Frame = -1

Query: 901 PFEKSQVPRFSFNTSGGNLSGETLLQQSAGAAGPGYGMAIGTSGAYATTVP-------GL 743
           P E+S +PRFS N   GN + E  LQQSA ++      +    G   T+ P       G 
Sbjct: 89  PLERSHIPRFSSNAVSGNTTAEIQLQQSAISSLGSSAFSKVHGGMPVTSNPTGPMGELGF 148

Query: 742 PGSVHYSNT------YDTSSLGPKMNKDRNMEPFSSVSSLDHPSDKGAFGKASEYEGGSI 581
            G V YS++          ++     K      F++    D P+     GK  E  GGS 
Sbjct: 149 AGPVQYSSSEHQKHGLTKGAVASSAEKTSEGHFFAANRVDDFPTSLST-GKILE-NGGSS 206

Query: 580 HTSGNESSLVQGGMLNNVTEMAVLRST-----GKLPVSQSPSAPIMVFKEQHLKQLRAQC 416
           +     S +VQGG   + +E+ ++RST     GK PV Q  +   M F EQ L+QLRAQC
Sbjct: 207 NMFAEASKIVQGGRQTSNSELTMIRSTSPRDVGKSPVFQGSALSGMPFNEQQLRQLRAQC 266

Query: 415 LVYLAFRNGLKPKKLHLDFALGNVFPKE----EGPSKDMIEQKGKEQLFDGTSNASDV-- 254
           LV+LAFRN L PKKLHLD ALGN   K+    +GP K++I+ KGK Q  + +++  +V  
Sbjct: 267 LVFLAFRNDLMPKKLHLDIALGNAVSKDGGTLDGPRKELIDYKGKAQSSNESTSIPEVLM 326

Query: 253 PFGRLENSRESDNL 212
             GRL N++ESD +
Sbjct: 327 SCGRLNNAKESDKV 340


>ref|XP_002311805.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222851625|gb|EEE89172.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 3427

 Score =  134 bits (336), Expect = 4e-29
 Identities = 95/254 (37%), Positives = 132/254 (51%), Gaps = 24/254 (9%)
 Frame = -1

Query: 901 PFEKSQVPRFSFNTSGGNLSGETLLQQSAGAAGPGYGMAIGTSGAYATTVP-------GL 743
           P E+S +PRFS N   GN + E  LQQSA ++      +    G   T+ P       G 
Sbjct: 226 PLERSHIPRFSSNAVSGNTTAEIQLQQSAISSLGSSAFSKVHGGMPVTSNPTGPMGELGF 285

Query: 742 PGSVHYSNT------YDTSSLGPKMNKDRNMEPFSSVSSLDHPSDKGAFGKASEYEGGSI 581
            G V YS++          ++     K      F++    D P+     GK  E  GGS 
Sbjct: 286 AGPVQYSSSEHQKHGLTKGAVASSAEKTSEGHFFAANRVDDFPTSLST-GKILE-NGGSS 343

Query: 580 HTSGNESSLVQGGMLNNVTEMAVLRST-----GKLPVSQSPSAPIMVFKEQHLKQLRAQC 416
           +     S +VQGG   + +E+ ++RST     GK PV Q  +   M F EQ L+QLRAQC
Sbjct: 344 NMFAEASKIVQGGRQTSNSELTMIRSTSPRDVGKSPVFQGSALSGMPFNEQQLRQLRAQC 403

Query: 415 LVYLAFRNGLKPKKLHLDFALGNVFPKE----EGPSKDMIEQKGKEQLFDGTSNASDV-- 254
           LV+LAFRN L PKKLHLD ALGN   K+    +GP K++I+ KGK Q  + +++  +V  
Sbjct: 404 LVFLAFRNDLMPKKLHLDIALGNAVSKDGGTLDGPRKELIDYKGKAQSSNESTSIPEVLM 463

Query: 253 PFGRLENSRESDNL 212
             GRL N++ESD +
Sbjct: 464 SCGRLNNAKESDKV 477


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