BLASTX nr result
ID: Cnidium21_contig00033027
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00033027 (352 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera] 67 1e-09 emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera] 66 3e-09 gb|AAO23078.1| polyprotein [Glycine max] 63 2e-08 gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 62 4e-08 ref|XP_002333289.1| predicted protein [Populus trichocarpa] gi|2... 62 6e-08 >emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera] Length = 1360 Score = 67.4 bits (163), Expect = 1e-09 Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 6/123 (4%) Frame = -1 Query: 352 VGGLQGEIKGMIRLLEPATLEQALKLARFYEQSQISQTKKGGSYKSNFSSQTSYK-FTAE 176 + GLQ EI+ +++ +P TL + +AR E+ Q K + QT ++ + Sbjct: 203 IAGLQDEIRIDVKIKQPRTLADTIGVARLIEERNQLQRKP--------TQQTRFQPASVT 254 Query: 175 PLISGTSSKSTLIAPTKSSETVSSKPRPLTY-----SQREERRQKGLCFYCDEKFVKGHE 11 P S + L P SS +P T+ + ERR+KGLC+YCDEKFV GH Sbjct: 255 PKASPNPTAGVLGPPPTQHMNQSSNAQPATFHRITNQEARERREKGLCYYCDEKFVAGHR 314 Query: 10 CKK 2 C++ Sbjct: 315 CER 317 >emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera] Length = 446 Score = 65.9 bits (159), Expect = 3e-09 Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 2/119 (1%) Frame = -1 Query: 352 VGGLQGEIKGMIRLLEPATLEQALKLARFYEQSQISQTKKGGSYKSNFSSQTSYKFTAEP 173 +GGL +++ ++ ++P TL A+ LAR YE + ++S+ + Sbjct: 275 IGGLNEDVRIDVQAMKPPTLSAAVGLARLYEVK--------------YHKRSSFNLEPKK 320 Query: 172 LISGTSSKSTLIAPTKSSETVSSKP--RPLTYSQREERRQKGLCFYCDEKFVKGHECKK 2 +S S T +S +SS P R L+ ++ +ERR KGLCF CDEKF GH CKK Sbjct: 321 TVSTNS--------TVTSRPLSSTPAIRRLSPTEMKERRDKGLCFNCDEKFAPGHRCKK 371 >gb|AAO23078.1| polyprotein [Glycine max] Length = 1552 Score = 63.2 bits (152), Expect = 2e-08 Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 10/125 (8%) Frame = -1 Query: 352 VGGLQGEIKGMIRLLEPATLEQALKLARFYEQSQIS--QTKKGGSYKSNFSSQTSYKFTA 179 V GLQ EI ++ +EP TL +A+ LA+ +E+ S +TK + NF+S TS Sbjct: 218 VSGLQEEISRDVKAMEPRTLTKAVALAKLFEEKYTSPPKTKTFSNLARNFTSNTSATQKY 277 Query: 178 EPLISGTSSKSTLIAPTKSSETVSSKP--------RPLTYSQREERRQKGLCFYCDEKFV 23 P + + P T S+KP + ++ ++ + RR+K LC++CDEKF Sbjct: 278 PPTNQKNDNPKPNLPPLLP--TPSTKPFNLRNQNIKKISPAEIQLRREKNLCYFCDEKFS 335 Query: 22 KGHEC 8 H+C Sbjct: 336 PAHKC 340 >gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris] Length = 1631 Score = 62.4 bits (150), Expect = 4e-08 Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 21/138 (15%) Frame = -1 Query: 352 VGGLQGEIKGMIRLLEPATLEQALKLA-RFYEQSQISQTKKGGSYKSNFS--SQTSYKFT 182 + GL E++ IR+L P L+QA++LA + E+++++ ++ G +FS ++ Sbjct: 295 IHGLNPELQSEIRVLNPYNLDQAMELALKLEERNRVNGARRTGPRSGSFSIYNRGPNSNP 354 Query: 181 AEPLISGT------SSKSTLIAPTKSSETVSS-KPRPL-----------TYSQREERRQK 56 + P + G+ S+KS I S +V++ KP PL T + +E+R K Sbjct: 355 SLPSVYGSQGGSNASTKSWAINSNASQTSVNNAKPPPLSSRGFGEMRRLTEKELQEKRAK 414 Query: 55 GLCFYCDEKFVKGHECKK 2 GLCF CDEK+ GH+C++ Sbjct: 415 GLCFKCDEKWGVGHQCRR 432 >ref|XP_002333289.1| predicted protein [Populus trichocarpa] gi|222835888|gb|EEE74309.1| predicted protein [Populus trichocarpa] Length = 425 Score = 61.6 bits (148), Expect = 6e-08 Identities = 34/117 (29%), Positives = 59/117 (50%) Frame = -1 Query: 352 VGGLQGEIKGMIRLLEPATLEQALKLARFYEQSQISQTKKGGSYKSNFSSQTSYKFTAEP 173 +GGL+ +I I + +P +L++A+ LAR ++ Q + + N + S+ Sbjct: 212 MGGLKPDIAEGIMMFKPKSLKEAISLARMRDEQLTRQRRNSKPFSINHNPIASF------ 265 Query: 172 LISGTSSKSTLIAPTKSSETVSSKPRPLTYSQREERRQKGLCFYCDEKFVKGHECKK 2 +PTKS + K L + + ++RR +G+CF CDEKF GH+C+K Sbjct: 266 ------------SPTKSPAAMPMKR--LAWDEMQKRRSQGICFNCDEKFTPGHKCQK 308