BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033021
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874874.1| F-box family protein [Arabidopsis lyrata sub...    65   8e-09
ref|XP_002321990.1| f-box family protein [Populus trichocarpa] g...    62   4e-08
ref|XP_003598921.1| F-box family-1 [Medicago truncatula] gi|3554...    62   6e-08
ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    59   4e-07
ref|NP_192231.1| putative F-box/FBD/LRR-repeat protein [Arabidop...    58   7e-07

>ref|XP_002874874.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320711|gb|EFH51133.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 505

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
 Frame = -1

Query: 348 PDDMLHSIMSIMVVDDVVWTSVLSTRWKSVWTTLPFLNFEFVH--KVPKDVIARIVNQIF 175
           PD ++H I+ ++ +     TS+LS RW+S++ +LP L+F  ++  K PK + +  + ++ 
Sbjct: 36  PDSLIHQILLLLPLKSAAQTSLLSKRWRSLFLSLPDLDFTSINDLKNPKSISSNSIYKVL 95

Query: 174 ATRNHLCQVLRLKLNVDDVFTIRSLEQIVRYAVNHGVEDLNVRSVDCKFF-----IYTSS 10
           + RNH        L      T  SL  ++R AV H V+DL++      +F     I TS 
Sbjct: 96  SLRNHRDFNNLRSLRFRAPITFTSLNSLIRLAVTHQVQDLDIEVTTKDYFNFPRWIVTSQ 155

Query: 9   SLR 1
            LR
Sbjct: 156 DLR 158


>ref|XP_002321990.1| f-box family protein [Populus trichocarpa]
           gi|222868986|gb|EEF06117.1| f-box family protein
           [Populus trichocarpa]
          Length = 356

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/104 (31%), Positives = 55/104 (52%)
 Frame = -1

Query: 348 PDDMLHSIMSIMVVDDVVWTSVLSTRWKSVWTTLPFLNFEFVHKVPKDVIARIVNQIFAT 169
           PD ++H I+  + ++  + TSVLS RWK++W ++P LNF       +    + + ++ + 
Sbjct: 16  PDYIIHEILCFLEINQAIRTSVLSERWKNLWASVPDLNFN-SKSFTEQTFPKFLRRVMSK 74

Query: 168 RNHLCQVLRLKLNVDDVFTIRSLEQIVRYAVNHGVEDLNVRSVD 37
           R   C V RL +       + S+E ++ YAV H VED    S D
Sbjct: 75  RED-CNVRRLDMFAHLPIRLSSMEGLINYAVAHQVEDFRFVSDD 117


>ref|XP_003598921.1| F-box family-1 [Medicago truncatula] gi|355487969|gb|AES69172.1|
           F-box family-1 [Medicago truncatula]
          Length = 384

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
 Frame = -1

Query: 348 PDDMLHSIMSIMVVDDVVWTSVLSTRWKSVWTTLPFLNFEFVHKVPKDVIARIVNQIFAT 169
           PD ++  I+S + V   V TS+LS RWK++W  LP L     H        + V  + + 
Sbjct: 21  PDGLILHILSSLKVKQTVQTSILSKRWKNLWKHLPTLTLTSSHFKTLKAFTKFVTPLLSL 80

Query: 168 RNHLCQVLRLKLNVDDVFTIRSLEQIVRYAVNHGVEDLNVRSV-------DCKFFIYTSS 10
           RN    +  LK   +     R  E+I+ YAV+H V +L ++          C F   T +
Sbjct: 81  RNVPTSLHTLKFIYNGTIDPRLFEKILNYAVSHNVNELQLKGTCDIQQLPSCFFSCNTLT 140

Query: 9   SLR 1
           SLR
Sbjct: 141 SLR 143


>ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 450

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 17/133 (12%)
 Frame = -1

Query: 348 PDDMLHSIMSIMVVDDVVWTSVLSTRWKSVWTTLPFLNF---EFVHKVP-KDVIARIVNQ 181
           PD ++H I+S M   D + T VLS RW+ +W ++P LNF    F+  V  K  +  ++N 
Sbjct: 62  PDCIIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLNFSSKSFMRLVDFKKFVLWVLNH 121

Query: 180 IFATRNHLCQVLRLKLNVDDVFTIRSLEQIVRYAVNHGVEDLNVR-------------SV 40
                +H+  ++  +  VD       L +++ YA +HGVE++ +               V
Sbjct: 122 --RDSSHVKLLVYYRFGVDYATDQGLLNKVIEYAASHGVEEIKINLRAKTAGRTSGSPPV 179

Query: 39  DCKFFIYTSSSLR 1
           +  F ++T  SL+
Sbjct: 180 EIPFSLFTCQSLK 192


>ref|NP_192231.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75267838|sp|Q9ZR09.1|FDL25_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At4g03220
           gi|4262150|gb|AAD14450.1| hypothetical protein
           [Arabidopsis thaliana] gi|7270192|emb|CAB77807.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332656894|gb|AEE82294.1| putative
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 498

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
 Frame = -1

Query: 348 PDDMLHSIMSIMVVDDVVWTSVLSTRWKSVWTTLPFLNFEFVH--KVPKDVIARIVNQIF 175
           PD + H I+ ++ +      S+LS RW+S++ +LP L+F  ++  K PK   +  + ++ 
Sbjct: 30  PDSLNHQILLLLPLKSAAQASLLSKRWRSLFLSLPDLDFTSINDLKNPKSFSSNSIYKVL 89

Query: 174 ATRNHLCQVLRLKLNVDDVFTIRSLEQIVRYAVNHGVEDLNVRSVDCKFF-----IYTSS 10
           + R+H        L      T  SL  ++R AV H V+DL++      +F     I TS 
Sbjct: 90  SLRSHRDSNNLRSLRFRVPVTFTSLNSLIRLAVTHQVQDLDIEVTTKDYFNFPRWIVTSQ 149

Query: 9   SLR 1
           +LR
Sbjct: 150 NLR 152