BLASTX nr result

ID: Cnidium21_contig00032994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032994
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synth...   147   3e-39
ref|XP_004152099.1| PREDICTED: bifunctional glutamate/proline--t...   145   1e-38
ref|XP_004167864.1| PREDICTED: proline--tRNA ligase-like, partia...   145   1e-38
gb|ABK95302.1| unknown [Populus trichocarpa]                          145   9e-38
ref|XP_002301553.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-37

>ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Vitis vinifera]
           gi|297744088|emb|CBI37058.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  147 bits (372), Expect(2) = 3e-39
 Identities = 72/95 (75%), Positives = 78/95 (82%), Gaps = 3/95 (3%)
 Frame = +2

Query: 8   YAV*EIGVMVMVHGDDKGLVLPPKVAPSQVIVVP---KDDNNQAILDACSDAVKTLTKAG 178
           Y+   IGVMVMVHGDDKGLV+PPKVA  Q+IVVP   KD + QAI DAC   V TL +AG
Sbjct: 293 YSTRTIGVMVMVHGDDKGLVMPPKVASVQIIVVPVPFKDADTQAIFDACDATVNTLNEAG 352

Query: 179 LRAKADLRDNYSPGWKYSHWEMKGVPLRIEIGPKD 283
            RA+ADLRDNYSPGWKYSHWEMKGVPLRIEIGPKD
Sbjct: 353 FRAEADLRDNYSPGWKYSHWEMKGVPLRIEIGPKD 387



 Score = 39.3 bits (90), Expect(2) = 3e-39
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +1

Query: 277 KRLANNQVRAVRRDNFGKVDIPILSL 354
           K LAN Q RAVRRDN  K+DIPI++L
Sbjct: 386 KDLANKQARAVRRDNSAKIDIPIVNL 411


>ref|XP_004152099.1| PREDICTED: bifunctional glutamate/proline--tRNA ligase-like
           [Cucumis sativus]
          Length = 511

 Score =  145 bits (365), Expect(2) = 1e-38
 Identities = 71/95 (74%), Positives = 77/95 (81%), Gaps = 3/95 (3%)
 Frame = +2

Query: 8   YAV*EIGVMVMVHGDDKGLVLPPKVAPSQVIVVP---KDDNNQAILDACSDAVKTLTKAG 178
           Y+   IGVMVMVHGDDKGLVLPPKVA  QVI+VP   KD + Q I DACS  + TLT AG
Sbjct: 287 YSTRTIGVMVMVHGDDKGLVLPPKVASVQVIIVPVPYKDADTQGIFDACSATLDTLTAAG 346

Query: 179 LRAKADLRDNYSPGWKYSHWEMKGVPLRIEIGPKD 283
           +RA+ D RDNYSPGWKYSHWEMKGVPLRIEIGPKD
Sbjct: 347 IRAEVDSRDNYSPGWKYSHWEMKGVPLRIEIGPKD 381



 Score = 40.0 bits (92), Expect(2) = 1e-38
 Identities = 21/26 (80%), Positives = 21/26 (80%)
 Frame = +1

Query: 277 KRLANNQVRAVRRDNFGKVDIPILSL 354
           K LANNQVRAVRRDN GK DIP  SL
Sbjct: 380 KDLANNQVRAVRRDNSGKKDIPRDSL 405


>ref|XP_004167864.1| PREDICTED: proline--tRNA ligase-like, partial [Cucumis sativus]
          Length = 227

 Score =  145 bits (365), Expect(2) = 1e-38
 Identities = 71/95 (74%), Positives = 77/95 (81%), Gaps = 3/95 (3%)
 Frame = +2

Query: 8   YAV*EIGVMVMVHGDDKGLVLPPKVAPSQVIVVP---KDDNNQAILDACSDAVKTLTKAG 178
           Y+   IGVMVMVHGDDKGLVLPPKVA  QVI+VP   KD + Q I DACS  + TLT AG
Sbjct: 3   YSTRTIGVMVMVHGDDKGLVLPPKVASVQVIIVPVPYKDADTQGIFDACSATLDTLTAAG 62

Query: 179 LRAKADLRDNYSPGWKYSHWEMKGVPLRIEIGPKD 283
           +RA+ D RDNYSPGWKYSHWEMKGVPLRIEIGPKD
Sbjct: 63  IRAEVDSRDNYSPGWKYSHWEMKGVPLRIEIGPKD 97



 Score = 40.0 bits (92), Expect(2) = 1e-38
 Identities = 21/26 (80%), Positives = 21/26 (80%)
 Frame = +1

Query: 277 KRLANNQVRAVRRDNFGKVDIPILSL 354
           K LANNQVRAVRRDN GK DIP  SL
Sbjct: 96  KDLANNQVRAVRRDNSGKKDIPRDSL 121


>gb|ABK95302.1| unknown [Populus trichocarpa]
          Length = 498

 Score =  145 bits (365), Expect(2) = 9e-38
 Identities = 71/95 (74%), Positives = 78/95 (82%), Gaps = 3/95 (3%)
 Frame = +2

Query: 8   YAV*EIGVMVMVHGDDKGLVLPPKVAPSQVIVVP---KDDNNQAILDACSDAVKTLTKAG 178
           Y+   IGVMVMVHGDDKGLVLPPKV+  QVIVVP   KD N Q I DAC+  V TL +AG
Sbjct: 274 YSTRTIGVMVMVHGDDKGLVLPPKVSSVQVIVVPVPFKDANTQGIFDACAATVDTLCEAG 333

Query: 179 LRAKADLRDNYSPGWKYSHWEMKGVPLRIEIGPKD 283
           +RA+AD R+NYSPGWKYSHWEMKGVPLRIEIGPKD
Sbjct: 334 IRAEADYRENYSPGWKYSHWEMKGVPLRIEIGPKD 368



 Score = 37.0 bits (84), Expect(2) = 9e-38
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = +1

Query: 277 KRLANNQVRAVRRDNFGKVDI 339
           K LANNQVRAVRRDN  KVDI
Sbjct: 367 KDLANNQVRAVRRDNAAKVDI 387


>ref|XP_002301553.1| predicted protein [Populus trichocarpa] gi|222843279|gb|EEE80826.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  144 bits (364), Expect(2) = 1e-37
 Identities = 71/95 (74%), Positives = 78/95 (82%), Gaps = 3/95 (3%)
 Frame = +2

Query: 8   YAV*EIGVMVMVHGDDKGLVLPPKVAPSQVIVVP---KDDNNQAILDACSDAVKTLTKAG 178
           Y+   IGVMVMVHGDDKGLVLPPKVA  QVIVVP   KD + Q I DAC+  V TL +AG
Sbjct: 274 YSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVVPVPYKDADTQGIFDACAATVDTLCEAG 333

Query: 179 LRAKADLRDNYSPGWKYSHWEMKGVPLRIEIGPKD 283
           +RA+AD R+NYSPGWKYSHWEMKGVPLRIEIGPKD
Sbjct: 334 IRAEADFRENYSPGWKYSHWEMKGVPLRIEIGPKD 368



 Score = 37.0 bits (84), Expect(2) = 1e-37
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = +1

Query: 277 KRLANNQVRAVRRDNFGKVDI 339
           K LANNQVRAVRRDN  KVDI
Sbjct: 367 KDLANNQVRAVRRDNAAKVDI 387


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