BLASTX nr result

ID: Cnidium21_contig00032973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032973
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif...    60   2e-07
emb|CBI28700.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]    60   2e-07
ref|XP_002520729.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
          Length = 486

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
 Frame = -1

Query: 194 RSINPGLLTTSNAPLGSSQPLVYS*RNST-------NDKRSRQ*KESCILTRSCLNSLTI 36
           +S+  G++       GSSQPLVY+ RNS        NDKRSRQ KES IL+RSCL +L+ 
Sbjct: 177 QSLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSG 236

Query: 35  DGGTSGARLR 6
           D G +GA L+
Sbjct: 237 DSGAAGALLK 246


>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
 Frame = -1

Query: 194 RSINPGLLTTSNAPLGSSQPLVYS*RNST-------NDKRSRQ*KESCILTRSCLNSLTI 36
           +S+  G++       GSSQPLVY+ RNS        NDKRSRQ KES IL+RSCL +L+ 
Sbjct: 177 QSLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSG 236

Query: 35  DGGTSGARLR 6
           D G +GA L+
Sbjct: 237 DSGAAGALLK 246


>emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]
          Length = 603

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
 Frame = -1

Query: 194 RSINPGLLTTSNAPLGSSQPLVYS*RNST-------NDKRSRQ*KESCILTRSCLNSLTI 36
           +S+  G++       GSSQPLVY+ RNS        NDKRSRQ KES IL+RSCL +L+ 
Sbjct: 177 QSLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSG 236

Query: 35  DGGTSGARLR 6
           D G +GA L+
Sbjct: 237 DSGAAGALLK 246


>ref|XP_002520729.1| conserved hypothetical protein [Ricinus communis]
           gi|223540114|gb|EEF41691.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 515

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
 Frame = -1

Query: 194 RSINPGLLTTSNAPLGSSQPLVYS*RNST-------NDKRSRQ*KESCILTRSCLNSLTI 36
           +S+  G++    +  GS + LVYS RNS        NDKR+RQ KES ILTRSCL SLT 
Sbjct: 171 QSLKLGIVPGPTSSPGSCETLVYSIRNSVDVSNISWNDKRTRQGKESSILTRSCLYSLTG 230

Query: 35  DGGTSGARLR 6
           D G +G  L+
Sbjct: 231 DSGAAGTLLK 240


>ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|222857036|gb|EEE94583.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
 Frame = -1

Query: 194 RSINPGLLTTSNAPLGSSQPLVYS*RN-------STNDKRSRQ*KESCILTRSCLNSLTI 36
           RS+  G++     P GS QPLVY  RN       S NDK++RQ KES  LTR CL  L+ 
Sbjct: 176 RSLKLGIVPGPTLPHGSCQPLVYGIRNAVEVSNFSWNDKKTRQGKESSTLTRYCLTPLSG 235

Query: 35  DGGTSGARLR 6
           + G +GA LR
Sbjct: 236 ENGAAGAVLR 245


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