BLASTX nr result

ID: Cnidium21_contig00032933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032933
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83327.1| hypothetical protein VITISV_034014 [Vitis vinifera]    70   1e-10
ref|XP_002278704.1| PREDICTED: uncharacterized protein LOC100247...    70   2e-10
ref|XP_002886801.1| hypothetical protein ARALYDRAFT_315473 [Arab...    62   4e-08
emb|CBI26577.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|NP_566028.1| uncharacterized protein [Arabidopsis thaliana] ...    60   2e-07

>emb|CAN83327.1| hypothetical protein VITISV_034014 [Vitis vinifera]
          Length = 139

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
 Frame = +2

Query: 83  LPWHPLLLPCKKPLQY--SPNRR---LVIQSFRRGDFDAFKSRIASGEFWRDA----NDR 235
           LPWHPL     + L+   +P R    + +++FRR DFD F  R+ASG+ WRDA    ND 
Sbjct: 5   LPWHPLFSSKPQTLRXFAAPVRHRLPMPVRAFRRSDFDGFAKRMASGDAWRDAWRSANDG 64

Query: 236 FEQLVYETKKTAQSIDRRY 292
           FE L++E KKTA+ I+R+Y
Sbjct: 65  FELLIFEAKKTAERIBRQY 83


>ref|XP_002278704.1| PREDICTED: uncharacterized protein LOC100247606 [Vitis vinifera]
          Length = 244

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 9/82 (10%)
 Frame = +2

Query: 74  TNLLPWHPLLLPCKKPLQY--SPNRR---LVIQSFRRGDFDAFKSRIASGEFWRDA---- 226
           T  LPWHPL     + L+   +P R    + +++FRR DFD F  R+ASG+ WRDA    
Sbjct: 2   TTSLPWHPLFSSKPQTLRRFAAPVRHRLPMPVRAFRRSDFDGFAKRMASGDAWRDAWRSA 61

Query: 227 NDRFEQLVYETKKTAQSIDRRY 292
           ND FE L++E KKTA+ I+R+Y
Sbjct: 62  NDGFELLIFEAKKTAERINRQY 83


>ref|XP_002886801.1| hypothetical protein ARALYDRAFT_315473 [Arabidopsis lyrata subsp.
           lyrata] gi|297332642|gb|EFH63060.1| hypothetical protein
           ARALYDRAFT_315473 [Arabidopsis lyrata subsp. lyrata]
          Length = 247

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
 Frame = +2

Query: 146 LVIQSFRRGDFDAFKSRIASGEFWRDA----NDRFEQLVYETKKTAQSIDRRY 292
           L +++F+RGDFD F   + SG+ WRDA    ND FEQ V+E KKTA+ IDR+Y
Sbjct: 28  LQVKAFQRGDFDRFADNVKSGKAWRDAWRSANDGFEQFVFEAKKTAERIDRQY 80


>emb|CBI26577.3| unnamed protein product [Vitis vinifera]
          Length = 214

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 4/51 (7%)
 Frame = +2

Query: 152 IQSFRRGDFDAFKSRIASGEFWRDA----NDRFEQLVYETKKTAQSIDRRY 292
           +++FRR DFD F  R+ASG+ WRDA    ND FE L++E KKTA+ I+R+Y
Sbjct: 3   VRAFRRSDFDGFAKRMASGDAWRDAWRSANDGFELLIFEAKKTAERINRQY 53


>ref|NP_566028.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13899075|gb|AAK48959.1|AF370532_1 Unknown protein
           [Arabidopsis thaliana] gi|18377520|gb|AAL66926.1|
           unknown protein [Arabidopsis thaliana]
           gi|20196922|gb|AAC31837.2| expressed protein
           [Arabidopsis thaliana] gi|330255384|gb|AEC10478.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 248

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
 Frame = +2

Query: 146 LVIQSFRRGDFDAFKSRIASGEFWRDA----NDRFEQLVYETKKTAQSIDRRY 292
           L +++F+RGDFD     + SG+ WRDA    ND FEQ V+E KKTA+ IDR+Y
Sbjct: 25  LQVKAFQRGDFDRLADNVKSGKAWRDAWRSANDGFEQFVFEAKKTAERIDRQY 77


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