BLASTX nr result

ID: Cnidium21_contig00032932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032932
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284445.1| PREDICTED: 60S ribosomal protein L23a isofor...   132   2e-28
ref|XP_002284261.1| PREDICTED: 60S ribosomal protein L23a [Vitis...   132   2e-28
gb|ABR17687.1| unknown [Picea sitchensis]                             131   3e-28
ref|XP_002278186.1| PREDICTED: 60S ribosomal protein L23a-like [...   130   5e-28
gb|ABK23942.1| unknown [Picea sitchensis] gi|116791290|gb|ABK259...   130   7e-28

>ref|XP_002284445.1| PREDICTED: 60S ribosomal protein L23a isoform 1 [Vitis vinifera]
           gi|297746139|emb|CBI16195.3| unnamed protein product
           [Vitis vinifera]
          Length = 155

 Score =  132 bits (331), Expect = 2e-28
 Identities = 70/139 (50%), Positives = 96/139 (69%), Gaps = 1/139 (0%)
 Frame = +3

Query: 399 ESLTAARSVKCGAATLKRDPEEIGASNMNAKRKTTNK-RNSAIPFIVAPLKNSLDQYQVL 575
           ++  AA++VK GA+T K+  ++I  S    + KT  K RN   P I AP +N LDQYQ+L
Sbjct: 17  QAAKAAKAVKLGASTFKKKAKKIRTSVTFHRPKTLKKERNPKYPRISAPSRNKLDQYQIL 76

Query: 576 MYPIVTESAMKNMIENNTLVFLVDVRSDKTNIKDAFEMICKIRTTKVNTLTTFRGTKKAF 755
            YP+ TESAMK + +NNTLVF+VD+R++K  IKDA + +  I+T KVNTL    GTKKA+
Sbjct: 77  KYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAY 136

Query: 756 IKLGPDYNAIDVAKKFKFI 812
           ++L PDY+A+DVA K   I
Sbjct: 137 VRLTPDYDALDVANKIGII 155


>ref|XP_002284261.1| PREDICTED: 60S ribosomal protein L23a [Vitis vinifera]
          Length = 155

 Score =  132 bits (331), Expect = 2e-28
 Identities = 70/140 (50%), Positives = 95/140 (67%), Gaps = 1/140 (0%)
 Frame = +3

Query: 396 TESLTAARSVKCGAATLKRDPEEIGASNMNAKRKTTNK-RNSAIPFIVAPLKNSLDQYQV 572
           T +   A+++K G AT K+  ++I  S    + +T  K RN   P I AP +N LDQYQV
Sbjct: 16  THAAKTAKALKSGTATFKKKAKKIRTSVTFHRPRTLKKDRNPKYPRISAPSRNKLDQYQV 75

Query: 573 LMYPIVTESAMKNMIENNTLVFLVDVRSDKTNIKDAFEMICKIRTTKVNTLTTFRGTKKA 752
           L YP+ TESAMK + +NNTLVF+VD+R+DK  IKDA + + +I+T KVNTL    GTKKA
Sbjct: 76  LKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYEIQTKKVNTLIRPDGTKKA 135

Query: 753 FIKLGPDYNAIDVAKKFKFI 812
           +++L PDY+A+DVA K   I
Sbjct: 136 YVRLTPDYDALDVANKIGII 155


>gb|ABR17687.1| unknown [Picea sitchensis]
          Length = 154

 Score =  131 bits (329), Expect = 3e-28
 Identities = 71/135 (52%), Positives = 94/135 (69%), Gaps = 1/135 (0%)
 Frame = +3

Query: 411 AARSVKCGAATLKRDPEEIGASNMNAKRKTTNK-RNSAIPFIVAPLKNSLDQYQVLMYPI 587
           AA++VK GA+TLKR   +I  S +  + +T  + RN   P I AP +N LDQY+VL YP+
Sbjct: 20  AAKAVKAGASTLKRKSRKIRTSVIFHRPRTFKRPRNPKYPRISAPPRNKLDQYEVLKYPL 79

Query: 588 VTESAMKNMIENNTLVFLVDVRSDKTNIKDAFEMICKIRTTKVNTLTTFRGTKKAFIKLG 767
            TESAMK + +NNTLVF+VDVR+DK  IKDA + +  I+T KVNTL    G KKA+++L 
Sbjct: 80  TTESAMKKIEDNNTLVFIVDVRADKKKIKDAVKKMYDIQTKKVNTLIRPDGLKKAYVRLT 139

Query: 768 PDYNAIDVAKKFKFI 812
           PDY+A+DVA K   I
Sbjct: 140 PDYDALDVANKIGII 154


>ref|XP_002278186.1| PREDICTED: 60S ribosomal protein L23a-like [Vitis vinifera]
          Length = 155

 Score =  130 bits (327), Expect = 5e-28
 Identities = 69/135 (51%), Positives = 92/135 (68%), Gaps = 1/135 (0%)
 Frame = +3

Query: 411 AARSVKCGAATLKRDPEEIGASNMNAKRKTTNK-RNSAIPFIVAPLKNSLDQYQVLMYPI 587
           AA++VK G  T K+  ++I  S    + +T  K RN   P I AP +N LDQYQ+L YP+
Sbjct: 21  AAKTVKSGGGTFKKKAKKIRTSVTFHRPRTLKKERNPKYPRISAPPRNKLDQYQILKYPL 80

Query: 588 VTESAMKNMIENNTLVFLVDVRSDKTNIKDAFEMICKIRTTKVNTLTTFRGTKKAFIKLG 767
            TESAMK + +NNTLVF+VD+R+DK  IKDA + +  I+T KVNTL    GTKKA+++L 
Sbjct: 81  TTESAMKKIEDNNTLVFIVDIRADKKKIKDAMKKMYDIQTKKVNTLIRPDGTKKAYVRLT 140

Query: 768 PDYNAIDVAKKFKFI 812
           PDY+A+DVA K   I
Sbjct: 141 PDYDALDVANKIGII 155


>gb|ABK23942.1| unknown [Picea sitchensis] gi|116791290|gb|ABK25923.1| unknown
           [Picea sitchensis] gi|148908514|gb|ABR17369.1| unknown
           [Picea sitchensis]
          Length = 154

 Score =  130 bits (326), Expect = 7e-28
 Identities = 70/140 (50%), Positives = 97/140 (69%), Gaps = 1/140 (0%)
 Frame = +3

Query: 396 TESLTAARSVKCGAATLKRDPEEIGASNMNAKRKTTNK-RNSAIPFIVAPLKNSLDQYQV 572
           +++  AA++VK GA++LKR   +I  S +  + +T  + RN   P I AP +N LDQY+V
Sbjct: 15  SQAQKAAKAVKAGASSLKRKSRKIRTSVIFHRPRTFKRPRNPKYPRISAPPRNKLDQYEV 74

Query: 573 LMYPIVTESAMKNMIENNTLVFLVDVRSDKTNIKDAFEMICKIRTTKVNTLTTFRGTKKA 752
           L YP+ TESAMK + +NNTLVF+VDVR+DK  IKDA + +  I+T KVNTL    G KKA
Sbjct: 75  LKYPLTTESAMKKIEDNNTLVFIVDVRADKKKIKDAVKKMYDIQTKKVNTLIRPDGLKKA 134

Query: 753 FIKLGPDYNAIDVAKKFKFI 812
           +++L PDY+A+DVA K   I
Sbjct: 135 YVRLTPDYDALDVANKIGII 154


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