BLASTX nr result

ID: Cnidium21_contig00032911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032911
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 k...   107   8e-22
ref|XP_003552456.1| PREDICTED: probable membrane-associated 30 k...    96   4e-18
emb|CAN69783.1| hypothetical protein VITISV_012616 [Vitis vinifera]    94   1e-17
gb|AFK43394.1| unknown [Lotus japonicus]                               92   6e-17
ref|XP_002530318.1| Membrane-associated 30 kDa protein, chloropl...    91   1e-16

>ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 kDa protein,
           chloroplastic [Vitis vinifera]
           gi|297735245|emb|CBI17607.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/99 (56%), Positives = 71/99 (71%)
 Frame = -3

Query: 298 PNASYNRFFIVKAQPPSNTAFLGTSVGAQKFAGIHLVKSNIWQSSGFSANALGTRMNLFE 119
           P AS  R  ++K+      AF G  VGA K  GI + +S+ ++ +G    ALGT+MNLF+
Sbjct: 17  PCASNVRSLVLKS------AFFGHGVGALKVRGIRIARSSTYRCNGHGGGALGTQMNLFD 70

Query: 118 RFARVIKSYANAIVSAFEDPEKILEQAVTEMNDDLIKMR 2
           RFARV+KSYANA++S+FEDPEKILEQ V EMNDDL KMR
Sbjct: 71  RFARVVKSYANAVLSSFEDPEKILEQTVLEMNDDLTKMR 109


>ref|XP_003552456.1| PREDICTED: probable membrane-associated 30 kDa protein,
           chloroplastic-like [Glycine max]
          Length = 322

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/85 (57%), Positives = 63/85 (74%)
 Frame = -3

Query: 256 PPSNTAFLGTSVGAQKFAGIHLVKSNIWQSSGFSANALGTRMNLFERFARVIKSYANAIV 77
           PP  ++FL    GA +  G+ +  S+  + +     ALGT+MNLF RFARVIKSYANAI+
Sbjct: 24  PPFKSSFLRYRSGALEVPGMRVTYSDRLKCNCHGGGALGTQMNLFSRFARVIKSYANAII 83

Query: 76  SAFEDPEKILEQAVTEMNDDLIKMR 2
           S+FEDPEKILEQAV +MN+DLIK+R
Sbjct: 84  SSFEDPEKILEQAVLDMNNDLIKVR 108


>emb|CAN69783.1| hypothetical protein VITISV_012616 [Vitis vinifera]
          Length = 465

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/84 (58%), Positives = 57/84 (67%)
 Frame = -3

Query: 253 PSNTAFLGTSVGAQKFAGIHLVKSNIWQSSGFSANALGTRMNLFERFARVIKSYANAIVS 74
           P  ++F    V   K  G  +  SN  Q S   A ALG RM+L +RFARV+KSYANAI+S
Sbjct: 31  PLTSSFFNGGVRVLKVRGTXVANSNXSQCSRHGAAALGARMSLLDRFARVVKSYANAIIS 90

Query: 73  AFEDPEKILEQAVTEMNDDLIKMR 2
           + EDPEKILEQ V EMNDDLIKMR
Sbjct: 91  SMEDPEKILEQTVLEMNDDLIKMR 114


>gb|AFK43394.1| unknown [Lotus japonicus]
          Length = 326

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 54/108 (50%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
 Frame = -3

Query: 322 MPSTSLHKPNASYNRFFIVKAQPPSNTAFLGT-SVGAQKFAGIHLVKSNIWQSSGFSANA 146
           +PST     + S +    +  + P  T+FLGT +V   + +G+ +VK       G     
Sbjct: 11  LPSTPFQSSSPSPSSTLCM-LKKPLTTSFLGTGTVEVLRLSGMRVVKPVRAPRRG----- 64

Query: 145 LGTRMNLFERFARVIKSYANAIVSAFEDPEKILEQAVTEMNDDLIKMR 2
            G RMNLF+RFARV+KSYANA++S+FEDPEKILEQAV EMNDDL KMR
Sbjct: 65  -GARMNLFDRFARVVKSYANAVISSFEDPEKILEQAVLEMNDDLTKMR 111


>ref|XP_002530318.1| Membrane-associated 30 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223530174|gb|EEF32085.1|
           Membrane-associated 30 kDa protein, chloroplast
           precursor, putative [Ricinus communis]
          Length = 312

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 52/105 (49%), Positives = 68/105 (64%)
 Frame = -3

Query: 316 STSLHKPNASYNRFFIVKAQPPSNTAFLGTSVGAQKFAGIHLVKSNIWQSSGFSANALGT 137
           S++ +  ++S N   +VK  P   T+F    V A K       +S+ +   G     LGT
Sbjct: 27  SSNCNSSSSSGNTLSMVKP-PYLTTSFFNGGVKALKVTRTRTSRSHCFAHGG---GGLGT 82

Query: 136 RMNLFERFARVIKSYANAIVSAFEDPEKILEQAVTEMNDDLIKMR 2
           RMNLF+RF+RV+KSYANAI+S+FEDPEKIL+Q V EMNDDL KMR
Sbjct: 83  RMNLFDRFSRVVKSYANAILSSFEDPEKILDQTVLEMNDDLTKMR 127


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