BLASTX nr result

ID: Cnidium21_contig00032879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032879
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF36333.1| hypothetical protein [Ipomoea trifida]                137   7e-31
gb|AAS79596.1| putative vacuolar assembling protein [Ipomoea tri...   137   7e-31
ref|XP_002273250.2| PREDICTED: vacuolar protein sorting-associat...   132   3e-29
emb|CBI17115.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_002523748.1| vacuolar protein sorting vps41, putative [Ri...   128   6e-28

>dbj|BAF36333.1| hypothetical protein [Ipomoea trifida]
          Length = 1092

 Score =  137 bits (346), Expect = 7e-31
 Identities = 59/106 (55%), Positives = 83/106 (78%)
 Frame = -1

Query: 489  RSMNMKTMGIKSKSRAGGRCCVCFDPFSIKNVSVIAFYCCHAYHMTCLMDSANIVDDNKT 310
            RS+++K+M +KSK+R GGRCC+CFDPFS+++VS+IAF+CCHAYH+TCLM+S N V   K 
Sbjct: 970  RSLSIKSMEVKSKTRGGGRCCICFDPFSMQSVSIIAFFCCHAYHLTCLMESTNSVSSKKG 1029

Query: 309  SAATSHEGAWYYEYDDSVPENVDDSDIATLGSPQLRCILCTTATSK 172
            +AA S   + YYEYD+   +  +D D ++ G+PQ+RCILCTTA  +
Sbjct: 1030 AAAPSQGASSYYEYDNGEADEDEDEDTSS-GAPQMRCILCTTAADE 1074


>gb|AAS79596.1| putative vacuolar assembling protein [Ipomoea trifida]
          Length = 990

 Score =  137 bits (346), Expect = 7e-31
 Identities = 59/106 (55%), Positives = 83/106 (78%)
 Frame = -1

Query: 489  RSMNMKTMGIKSKSRAGGRCCVCFDPFSIKNVSVIAFYCCHAYHMTCLMDSANIVDDNKT 310
            RS+++K+M +KSK+R GGRCC+CFDPFS+++VS+IAF+CCHAYH+TCLM+S N V   K 
Sbjct: 868  RSLSIKSMEVKSKTRGGGRCCICFDPFSMQSVSIIAFFCCHAYHLTCLMESTNSVSSKKG 927

Query: 309  SAATSHEGAWYYEYDDSVPENVDDSDIATLGSPQLRCILCTTATSK 172
            +AA S   + YYEYD+   +  +D D ++ G+PQ+RCILCTTA  +
Sbjct: 928  AAAPSQGASSYYEYDNGEADEDEDEDTSS-GAPQMRCILCTTAADE 972


>ref|XP_002273250.2| PREDICTED: vacuolar protein sorting-associated protein 41 homolog
            [Vitis vinifera]
          Length = 960

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/104 (62%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
 Frame = -1

Query: 489  RSMNMKTMGIKSKSRAGGRCCVCFDPFSIKNVSVIAFYCCHAYHMTCLMDSANIVDDNKT 310
            R ++MKTM +KSK+R GGRCC+CFDPFSI+NVSVIAF+CCHAYHM CLMDS   V   + 
Sbjct: 859  RPLSMKTMEVKSKTRGGGRCCMCFDPFSIQNVSVIAFFCCHAYHMNCLMDSTYSVSGKQG 918

Query: 309  SAATSHEGAW-YYEYDDSVPENVDDSDIATLGSPQLRCILCTTA 181
              ATS E A  Y EYD+S    VD  D A+ G+P++RCILCTTA
Sbjct: 919  KGATSQETASDYDEYDNS----VDGEDDASSGAPRMRCILCTTA 958


>emb|CBI17115.3| unnamed protein product [Vitis vinifera]
          Length = 908

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/104 (62%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
 Frame = -1

Query: 489  RSMNMKTMGIKSKSRAGGRCCVCFDPFSIKNVSVIAFYCCHAYHMTCLMDSANIVDDNKT 310
            R ++MKTM +KSK+R GGRCC+CFDPFSI+NVSVIAF+CCHAYHM CLMDS   V   + 
Sbjct: 807  RPLSMKTMEVKSKTRGGGRCCMCFDPFSIQNVSVIAFFCCHAYHMNCLMDSTYSVSGKQG 866

Query: 309  SAATSHEGAW-YYEYDDSVPENVDDSDIATLGSPQLRCILCTTA 181
              ATS E A  Y EYD+S    VD  D A+ G+P++RCILCTTA
Sbjct: 867  KGATSQETASDYDEYDNS----VDGEDDASSGAPRMRCILCTTA 906


>ref|XP_002523748.1| vacuolar protein sorting vps41, putative [Ricinus communis]
            gi|223537052|gb|EEF38688.1| vacuolar protein sorting
            vps41, putative [Ricinus communis]
          Length = 955

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/105 (58%), Positives = 72/105 (68%)
 Frame = -1

Query: 489  RSMNMKTMGIKSKSRAGGRCCVCFDPFSIKNVSVIAFYCCHAYHMTCLMDSANIVDDNKT 310
            R+ NM+TM +KSK+R   RCC+CFDPFSI+NVSVI F+CCHAYHMTCLMDS NIV   + 
Sbjct: 856  RTPNMRTMVVKSKTRGDSRCCMCFDPFSIQNVSVIVFFCCHAYHMTCLMDSMNIVSGQRA 915

Query: 309  SAATSHEGAWYYEYDDSVPENVDDSDIATLGSPQLRCILCTTATS 175
            S   S E    YEY+D      DD D       +LRCILCTTA+S
Sbjct: 916  SGDASREQVLGYEYEDD-----DDDDNEANSGSRLRCILCTTASS 955


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