BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032877
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...    58   7e-07
gb|ABD33209.1| Ribonuclease H [Medicago truncatula]                    55   5e-06
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 676

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/72 (37%), Positives = 40/72 (55%)
 Frame = -3

Query: 236 MSGWRKPSPHVVEVNCKGVFDRPSKKAIVGCVMRNNRGEWIRGASGTIGLVVPVAAKLWS 57
           M  WRKP+   V +N  G       +A  G V+R+  G W+ G +  IG+     A+LW 
Sbjct: 505 MIAWRKPAEGWVTMNTDGASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLAELWG 564

Query: 56  IFYGLKLAWEKG 21
           ++YGL +AWE+G
Sbjct: 565 VYYGLVVAWERG 576


>gb|ABD33209.1| Ribonuclease H [Medicago truncatula]
          Length = 302

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/80 (31%), Positives = 45/80 (56%)
 Frame = -3

Query: 242 IIMSGWRKPSPHVVEVNCKGVFDRPSKKAIVGCVMRNNRGEWIRGASGTIGLVVPVAAKL 63
           I+   W++P    V++NC G      + A  G ++R + G WI+G S  IG    + A++
Sbjct: 197 IVYIDWKRPLDGWVKLNCDGACKGNGELAGCGGLLRQSDGTWIKGFSRKIGACDALHAEM 256

Query: 62  WSIFYGLKLAWEKGDVKHVV 3
           W ++ GL +AW +G + H++
Sbjct: 257 WGLYLGLDMAWREG-ISHLI 275


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/70 (35%), Positives = 41/70 (58%)
 Frame = -3

Query: 230 GWRKPSPHVVEVNCKGVFDRPSKKAIVGCVMRNNRGEWIRGASGTIGLVVPVAAKLWSIF 51
           GW+ P    +++N  G        A  G V+R++ G WI G +  IG+   V A+LW+++
Sbjct: 75  GWKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVY 134

Query: 50  YGLKLAWEKG 21
            GL+LAW++G
Sbjct: 135 VGLQLAWDRG 144


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/70 (35%), Positives = 41/70 (58%)
 Frame = -3

Query: 230 GWRKPSPHVVEVNCKGVFDRPSKKAIVGCVMRNNRGEWIRGASGTIGLVVPVAAKLWSIF 51
           GW+ P    +++N  G        A  G V+R++ G WI G +  IG+   V A+LW+++
Sbjct: 75  GWKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVY 134

Query: 50  YGLKLAWEKG 21
            GL+LAW++G
Sbjct: 135 VGLQLAWDRG 144