BLASTX nr result

ID: Cnidium21_contig00032823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032823
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633742.1| PREDICTED: LOW QUALITY PROTEIN: auxin transp...   128   5e-28
emb|CBI16927.3| unnamed protein product [Vitis vinifera]              128   5e-28
emb|CAN75802.1| hypothetical protein VITISV_016976 [Vitis vinifera]   128   5e-28
ref|XP_002525941.1| ubiquitin-protein ligase, putative [Ricinus ...   112   2e-23
ref|NP_186875.2| E3 ubiquitin-protein ligase UBR4 [Arabidopsis t...   101   7e-20

>ref|XP_003633742.1| PREDICTED: LOW QUALITY PROTEIN: auxin transport protein BIG-like
            [Vitis vinifera]
          Length = 6279

 Score =  128 bits (321), Expect = 5e-28
 Identities = 65/117 (55%), Positives = 85/117 (72%)
 Frame = +1

Query: 1    VESSVDSLILSVLQEFLQFVHVIFCNSNVFRNIQAFLVASVLDNLDADVWRYNKSGGNPM 180
            VESS ++L+L +L+EFL  V VIF  S+VF+NIQA ++ASVLDNLD+DVWRYNKS  NP 
Sbjct: 1482 VESSFENLVLLLLEEFLHLVRVIFWTSSVFQNIQACIIASVLDNLDSDVWRYNKSAANPK 1541

Query: 181  PPLSYFPRIVIYVLKLIGDIYQQNYQDFEFENLPEDGSGVLIADQIESISCHIRSEK 351
            PPL+YFPR VIY+LKLI ++ +Q YQ F+ ++            QI+S SC + SEK
Sbjct: 1542 PPLAYFPRSVIYILKLIVEVKKQTYQAFDVQD----------DFQIDSPSCRLHSEK 1588


>emb|CBI16927.3| unnamed protein product [Vitis vinifera]
          Length = 4380

 Score =  128 bits (321), Expect = 5e-28
 Identities = 65/117 (55%), Positives = 85/117 (72%)
 Frame = +1

Query: 1   VESSVDSLILSVLQEFLQFVHVIFCNSNVFRNIQAFLVASVLDNLDADVWRYNKSGGNPM 180
           VESS ++L+L +L+EFL  V VIF  S+VF+NIQA ++ASVLDNLD+DVWRYNKS  NP 
Sbjct: 348 VESSFENLVLLLLEEFLHLVRVIFWTSSVFQNIQACIIASVLDNLDSDVWRYNKSAANPK 407

Query: 181 PPLSYFPRIVIYVLKLIGDIYQQNYQDFEFENLPEDGSGVLIADQIESISCHIRSEK 351
           PPL+YFPR VIY+LKLI ++ +Q YQ F+ ++            QI+S SC + SEK
Sbjct: 408 PPLAYFPRSVIYILKLIVEVKKQTYQAFDVQD----------DFQIDSPSCRLHSEK 454


>emb|CAN75802.1| hypothetical protein VITISV_016976 [Vitis vinifera]
          Length = 5622

 Score =  128 bits (321), Expect = 5e-28
 Identities = 65/117 (55%), Positives = 85/117 (72%)
 Frame = +1

Query: 1    VESSVDSLILSVLQEFLQFVHVIFCNSNVFRNIQAFLVASVLDNLDADVWRYNKSGGNPM 180
            VESS ++L+L +L+EFL  V VIF  S+VF+NIQA ++ASVLDNLD+DVWRYNKS  NP 
Sbjct: 1136 VESSFENLVLLLLEEFLHLVRVIFWTSSVFQNIQACIIASVLDNLDSDVWRYNKSAANPK 1195

Query: 181  PPLSYFPRIVIYVLKLIGDIYQQNYQDFEFENLPEDGSGVLIADQIESISCHIRSEK 351
            PPL+YFPR VIY+LKLI ++ +Q YQ F+ ++            QI+S SC + SEK
Sbjct: 1196 PPLAYFPRSVIYILKLIVEVKKQTYQAFDVQD----------DFQIDSPSCRLHSEK 1242


>ref|XP_002525941.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534770|gb|EEF36461.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 4466

 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/115 (49%), Positives = 73/115 (63%)
 Frame = +1

Query: 1   VESSVDSLILSVLQEFLQFVHVIFCNSNVFRNIQAFLVASVLDNLDADVWRYNKSGGNPM 180
           VE S++ LIL +L+EFL FV V FCNSN  +NIQ  +VASVLDNLD+ +WRYN    N  
Sbjct: 69  VEGSLEGLILLLLEEFLLFVRVAFCNSNACQNIQVCIVASVLDNLDSSIWRYNNPATNSQ 128

Query: 181 PPLSYFPRIVIYVLKLIGDIYQQNYQDFEFENLPEDGSGVLIADQIESISCHIRS 345
           PPL YFPR V+Y+LK I D+ +Q +Q  + +    D  G     Q    SCH+ S
Sbjct: 129 PPLIYFPRSVLYILKRIQDLKRQTFQALDMKGFDTDLIGSSADLQDIYPSCHVHS 183


>ref|NP_186875.2| E3 ubiquitin-protein ligase UBR4 [Arabidopsis thaliana]
           gi|338817663|sp|Q9SRU2.2|BIG_ARATH RecName: Full=Auxin
           transport protein BIG; AltName: Full=Protein ATTENUATED
           SHADE AVOIDANCE 1; AltName: Full=Protein CORYMBOSA1;
           AltName: Full=Protein DARK OVER-EXPRESSION OF CAB 1;
           AltName: Full=Protein LOW PHOSPHATE-RESISTANT ROOT 1;
           AltName: Full=Protein TRANSPORT INHIBITOR RESPONSE 3;
           AltName: Full=Protein UMBRELLA 1
           gi|332640264|gb|AEE73785.1| E3 ubiquitin-protein ligase
           UBR4 [Arabidopsis thaliana]
          Length = 5098

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/116 (42%), Positives = 77/116 (66%)
 Frame = +1

Query: 4   ESSVDSLILSVLQEFLQFVHVIFCNSNVFRNIQAFLVASVLDNLDADVWRYNKSGGNPMP 183
           E +++SL L++++ FL  V +IF  S+VF+N+QA + AS++ NLD+ VWRY+ S  N  P
Sbjct: 341 EGNIESLSLALVEGFLNLVQLIFGKSSVFQNVQACVAASIVSNLDSSVWRYDGSSCNLTP 400

Query: 184 PLSYFPRIVIYVLKLIGDIYQQNYQDFEFENLPEDGSGVLIADQIESISCHIRSEK 351
           PL+YFPR VIY LKLI D+ +Q Y   +   L  + +   ++  ++S+  H+R EK
Sbjct: 401 PLAYFPRSVIYTLKLIQDLKRQPYHIHDLRVLESEVTYEDVSSTVDSVYFHLRQEK 456


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