BLASTX nr result

ID: Cnidium21_contig00032751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032751
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510956.1| peroxisomal biogenesis factor, putative [Ric...   363   3e-98
ref|XP_002267934.1| PREDICTED: peroxisomal membrane protein 11-4...   360   3e-97
emb|CAN67008.1| hypothetical protein VITISV_028688 [Vitis vinifera]   357   2e-96
ref|XP_002304410.1| predicted protein [Populus trichocarpa] gi|2...   351   2e-94
gb|ABK94819.1| unknown [Populus trichocarpa]                          351   2e-94

>ref|XP_002510956.1| peroxisomal biogenesis factor, putative [Ricinus communis]
           gi|223550071|gb|EEF51558.1| peroxisomal biogenesis
           factor, putative [Ricinus communis]
          Length = 226

 Score =  363 bits (932), Expect = 3e-98
 Identities = 178/226 (78%), Positives = 198/226 (87%), Gaps = 3/226 (1%)
 Frame = +3

Query: 87  MNDTVDKLVVFLAKRDGIDKLVKTFQYVSKLVNFQVEISNPNIALRAKKWEVASGLSRKA 266
           MNDTVDKLVVFLAKRDGIDKLVKTFQYVSKLVN+  E  +P IA R K+WEVASGLSRKA
Sbjct: 1   MNDTVDKLVVFLAKRDGIDKLVKTFQYVSKLVNWHAESKHPEIAQRFKQWEVASGLSRKA 60

Query: 267 FRTGRFLTGFNAIRRAPGSNKTFQLLAVLANAGEMVYFFFDHFLWLSRIEVLDPKLARRM 446
           FRTGRFLTGFNA+RR PGS+ TF+ LAVLANAGEMVYFFFDHFLWLSRI  LD KLA+RM
Sbjct: 61  FRTGRFLTGFNALRRGPGSSTTFRFLAVLANAGEMVYFFFDHFLWLSRIGTLDAKLAKRM 120

Query: 447 SFISAFGESFGYIFFIISDLILIREGVGKQRKIVMEK---PSESDDEVRKLRIDRTMRLM 617
           SFISAFGESFGYIFF+I+D I+IREG+ K+RK+V  K   P E  + ++K+R DR MRLM
Sbjct: 121 SFISAFGESFGYIFFVIADFIMIREGIRKERKLVSTKEDDPKEVQENIKKIRADRVMRLM 180

Query: 618 GVAANVADLIIAVADIEPNPFCNHAVTLGISGLVSAWAGWYRNWPS 755
            VAAN+ADLIIA+A+IEPNPFCNH VTLGISGLVSAWAGWYRNWPS
Sbjct: 181 AVAANIADLIIALAEIEPNPFCNHTVTLGISGLVSAWAGWYRNWPS 226


>ref|XP_002267934.1| PREDICTED: peroxisomal membrane protein 11-4 [Vitis vinifera]
           gi|296084211|emb|CBI24599.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  360 bits (923), Expect = 3e-97
 Identities = 180/227 (79%), Positives = 201/227 (88%), Gaps = 4/227 (1%)
 Frame = +3

Query: 87  MNDTVDKLVVFLAKRDGIDKLVKTFQYVSKLVNFQVEISNPNIALRAKKWEVASGLSRKA 266
           MNDTVDKLV+FLAKRDGIDKLVKTFQYVSKLV++ VE ++P+ A +AK+WEVASGLSRKA
Sbjct: 1   MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEAAHPDAAHKAKQWEVASGLSRKA 60

Query: 267 FRTGRFLTGFNAIRRAPGSNKTFQLLAVLANAGEMVYFFFDHFLWLSRIEVLDPKLARRM 446
           FR+GRFLTGFNA+RR PGS  TF+ LAVLANAGEMVYFFFDHFLWLSRI VLD KLARRM
Sbjct: 61  FRSGRFLTGFNALRRNPGSTPTFRFLAVLANAGEMVYFFFDHFLWLSRIGVLDAKLARRM 120

Query: 447 SFISAFGESFGYIFFIISDLILIREGVGKQRKIVMEKPSESDDE----VRKLRIDRTMRL 614
           SFISAFGESFGYIFFIISD I+I+ GV ++RK++     +S D+    VRK+R DR MRL
Sbjct: 121 SFISAFGESFGYIFFIISDFIMIKGGVEQERKLITTSTDKSTDDVKASVRKIREDRVMRL 180

Query: 615 MGVAANVADLIIAVADIEPNPFCNHAVTLGISGLVSAWAGWYRNWPS 755
           M VAANVADLIIAVADIEPNPFCNHAV+LGISGLVSAWAGWYRNWPS
Sbjct: 181 MAVAANVADLIIAVADIEPNPFCNHAVSLGISGLVSAWAGWYRNWPS 227


>emb|CAN67008.1| hypothetical protein VITISV_028688 [Vitis vinifera]
          Length = 227

 Score =  357 bits (916), Expect = 2e-96
 Identities = 179/227 (78%), Positives = 199/227 (87%), Gaps = 4/227 (1%)
 Frame = +3

Query: 87  MNDTVDKLVVFLAKRDGIDKLVKTFQYVSKLVNFQVEISNPNIALRAKKWEVASGLSRKA 266
           MNDTVDKLV+FLAKRDGIDKLVKTFQYVSKLV++ VE ++P+ A  AK+WEVASGLSRKA
Sbjct: 1   MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEAAHPDAAXXAKQWEVASGLSRKA 60

Query: 267 FRTGRFLTGFNAIRRAPGSNKTFQLLAVLANAGEMVYFFFDHFLWLSRIEVLDPKLARRM 446
           FR+GRFLTGFNA+RR PGS  TF+ LAVLANAGEMVYFFFDHFLWLSRI VLD KLA RM
Sbjct: 61  FRSGRFLTGFNALRRNPGSTPTFRFLAVLANAGEMVYFFFDHFLWLSRIGVLDAKLAXRM 120

Query: 447 SFISAFGESFGYIFFIISDLILIREGVGKQRKIVMEKPSESDDE----VRKLRIDRTMRL 614
           SFISAFGESFGYIFFIISD I+I+ GV ++RK++     +S D+    VRK+R DR MRL
Sbjct: 121 SFISAFGESFGYIFFIISDFIMIKGGVEQERKLITTSTDKSTDDVKASVRKIREDRVMRL 180

Query: 615 MGVAANVADLIIAVADIEPNPFCNHAVTLGISGLVSAWAGWYRNWPS 755
           M VAANVADLIIAVADIEPNPFCNHAV+LGISGLVSAWAGWYRNWPS
Sbjct: 181 MAVAANVADLIIAVADIEPNPFCNHAVSLGISGLVSAWAGWYRNWPS 227


>ref|XP_002304410.1| predicted protein [Populus trichocarpa] gi|222841842|gb|EEE79389.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  351 bits (900), Expect = 2e-94
 Identities = 170/227 (74%), Positives = 199/227 (87%), Gaps = 4/227 (1%)
 Frame = +3

Query: 87  MNDTVDKLVVFLAKRDGIDKLVKTFQYVSKLVNFQVEISNPNIALRAKKWEVASGLSRKA 266
           MNDTVD+LV+FLAKRDGIDKLVKTFQYVSKLV +QVE ++P++A R ++WEVASGL RKA
Sbjct: 1   MNDTVDRLVIFLAKRDGIDKLVKTFQYVSKLVRWQVEATHPDVARRFQQWEVASGLGRKA 60

Query: 267 FRTGRFLTGFNAIRRAPGSNKTFQLLAVLANAGEMVYFFFDHFLWLSRIEVLDPKLARRM 446
           FRTGRFLTGFNA+RR PGS  TF++LAVLANAGEMVYFFFDHFLWLSRI  LD KLA RM
Sbjct: 61  FRTGRFLTGFNALRRGPGSTPTFKILAVLANAGEMVYFFFDHFLWLSRIGTLDAKLAGRM 120

Query: 447 SFISAFGESFGYIFFIISDLILIREGVGKQRKIVM----EKPSESDDEVRKLRIDRTMRL 614
           SFISAFGESFGYIFFII+D I+I+EG+ ++R+++     +   ++ + +RK+R DR MRL
Sbjct: 121 SFISAFGESFGYIFFIIADFIIIKEGLKEERRLLTSSKEDTSKDATESLRKIRADRVMRL 180

Query: 615 MGVAANVADLIIAVADIEPNPFCNHAVTLGISGLVSAWAGWYRNWPS 755
           M VAANVAD IIA+ADIEPNPFCNHAVTLG+SGLVSAWAGWYRNWPS
Sbjct: 181 MAVAANVADFIIALADIEPNPFCNHAVTLGVSGLVSAWAGWYRNWPS 227


>gb|ABK94819.1| unknown [Populus trichocarpa]
          Length = 227

 Score =  351 bits (900), Expect = 2e-94
 Identities = 170/227 (74%), Positives = 199/227 (87%), Gaps = 4/227 (1%)
 Frame = +3

Query: 87  MNDTVDKLVVFLAKRDGIDKLVKTFQYVSKLVNFQVEISNPNIALRAKKWEVASGLSRKA 266
           MNDTVD+LV+FLAKRDGIDKLVKTFQYVSKLV +QVE ++P++A R ++WEVASGL RKA
Sbjct: 1   MNDTVDRLVIFLAKRDGIDKLVKTFQYVSKLVRWQVEATHPDVARRFQQWEVASGLGRKA 60

Query: 267 FRTGRFLTGFNAIRRAPGSNKTFQLLAVLANAGEMVYFFFDHFLWLSRIEVLDPKLARRM 446
           FRTGRFLTGFNA+RR PGS  TF++LAVLANAGEMVYFFFDHFLWLSRI  LD KLA RM
Sbjct: 61  FRTGRFLTGFNALRRGPGSTPTFKILAVLANAGEMVYFFFDHFLWLSRIGTLDAKLAGRM 120

Query: 447 SFISAFGESFGYIFFIISDLILIREGVGKQRKIVM----EKPSESDDEVRKLRIDRTMRL 614
           SFISAFGESFGYIFFII+D I+I+EG+ ++R+++     +   ++ + +RK+R DR MRL
Sbjct: 121 SFISAFGESFGYIFFIIADFIIIKEGLKQERRLLTSSKEDTSKDATESLRKIRADRVMRL 180

Query: 615 MGVAANVADLIIAVADIEPNPFCNHAVTLGISGLVSAWAGWYRNWPS 755
           M VAANVAD IIA+ADIEPNPFCNHAVTLG+SGLVSAWAGWYRNWPS
Sbjct: 181 MAVAANVADFIIALADIEPNPFCNHAVTLGVSGLVSAWAGWYRNWPS 227


Top