BLASTX nr result

ID: Cnidium21_contig00032749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032749
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA81858.1| brittle 1 protein-like [Solanum tuberosum]              66   5e-09
ref|XP_002285050.1| PREDICTED: protein brittle-1, chloroplastic/...    65   1e-08
emb|CAN73822.1| hypothetical protein VITISV_005135 [Vitis vinifera]    65   1e-08
ref|XP_004136345.1| PREDICTED: protein brittle-1, chloroplastic/...    59   7e-07
ref|XP_002281941.1| PREDICTED: protein brittle-1, chloroplastic/...    58   2e-06

>gb|ABA81858.1| brittle 1 protein-like [Solanum tuberosum]
          Length = 398

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 18/127 (14%)
 Frame = -2

Query: 329 MGIKDMQISKGNEDGLFSNFSHLGFQLSPQDCSSFYPGGLFASIGQSNGLGFAAISPNSG 150
           M  +D+Q  +  +DG  S  SHLG Q S QD S+F PGGLFAS+GQ   +GF   SPN  
Sbjct: 1   MARRDIQALECKKDGSMS-ISHLGLQWSLQD-SNFCPGGLFASVGQMGSMGFGVSSPNPS 58

Query: 149 E------------NDLYVKYVTSSP------EETRDGIVMNXXXXXXXXXXXXIANTSLR 24
           +            +DL +KY++ S           +G+V              ++N SLR
Sbjct: 59  DSRDENGGFKLPYSDLCMKYLSFSEGFKIVGNGEEEGVVKEKKKKGGLKIKLKVSNPSLR 118

Query: 23  RLVSGAI 3
           RL+SGAI
Sbjct: 119 RLISGAI 125


>ref|XP_002285050.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic [Vitis
           vinifera]
          Length = 397

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
 Frame = -2

Query: 329 MGIKDMQISKGNEDGLFSNFSHLGFQLSPQDCSSFYPGGLFASIGQ-SNGLGFAAISPNS 153
           MG + +Q+   N  G+F N   LG Q   Q+  +F+PGGLFAS+GQ   G G +  SPNS
Sbjct: 1   MGRRGLQVFDDNRKGVFPNCD-LGLQWGLQE-GAFHPGGLFASVGQVGMGFGISPNSPNS 58

Query: 152 GEN----------DLYVKYVTSS--------PEETRDGIVMNXXXXXXXXXXXXIANTSL 27
            +N          DLYVKYV+S         PE   +G   +            +AN SL
Sbjct: 59  RDNNNAGLKLPCMDLYVKYVSSPDGFKILGIPEAAEEG--SSNKGKVGLKLKVKVANPSL 116

Query: 26  RRLVSGAI 3
           RRL+SGAI
Sbjct: 117 RRLISGAI 124


>emb|CAN73822.1| hypothetical protein VITISV_005135 [Vitis vinifera]
          Length = 397

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
 Frame = -2

Query: 329 MGIKDMQISKGNEDGLFSNFSHLGFQLSPQDCSSFYPGGLFASIGQ-SNGLGFAAISPNS 153
           MG + +Q+   N  G+F N   LG Q   Q+  +F+PGGLFAS+GQ   G G +  SPNS
Sbjct: 1   MGRRGLQVLDDNRKGVFPNCD-LGLQWGLQE-GAFHPGGLFASVGQVGMGFGISPNSPNS 58

Query: 152 GEN----------DLYVKYVTSS--------PEETRDGIVMNXXXXXXXXXXXXIANTSL 27
            +N          DLYVKYV+S         PE   +G   +            +AN SL
Sbjct: 59  RDNNNAGLKLPCMDLYVKYVSSPDGFKILGIPEAAEEG--SSNKGKVGLKLKVKVANPSL 116

Query: 26  RRLVSGAI 3
           RRL+SGAI
Sbjct: 117 RRLISGAI 124


>ref|XP_004136345.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic-like
           [Cucumis sativus] gi|449524320|ref|XP_004169171.1|
           PREDICTED: protein brittle-1,
           chloroplastic/amyloplastic-like [Cucumis sativus]
          Length = 391

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 49/119 (41%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
 Frame = -2

Query: 329 MGIKDMQISKGNEDGLFSNFSHLGFQLSPQDCSSFYPGGLFASIGQSNGLGFAAISPNSG 150
           MG K  Q+     DG FS F  LG Q S Q+   F+PGGLFAS+GQ  G+GF  ISPNS 
Sbjct: 4   MGQKGTQVLAYKRDGFFSVFD-LGSQWSIQE-GHFHPGGLFASVGQM-GIGF-GISPNSS 59

Query: 149 END--------LYVKYVTSSPEETRDGIVMN--XXXXXXXXXXXXIANTSLRRLVSGAI 3
            +D        L +KYV S+     +   +N              + N SLRRL+SGAI
Sbjct: 60  NSDDANSLYTNLCMKYVPSAEAVNVEETFVNKKKKNKGGFQLRIKVENPSLRRLISGAI 118


>ref|XP_002281941.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic [Vitis
           vinifera] gi|147768735|emb|CAN60465.1| hypothetical
           protein VITISV_012495 [Vitis vinifera]
          Length = 400

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 53/132 (40%), Positives = 68/132 (51%), Gaps = 23/132 (17%)
 Frame = -2

Query: 329 MGIKDMQISKGNEDGLFSNFSHLGFQLSPQDCSSFYPGGLFASIGQSNGLGFAAISPNSG 150
           MG + +Q  + N D LFS  S LGFQ SPQ+ + F+PGGLFAS+GQ+ G+GF  ISPNS 
Sbjct: 1   MGGRGLQGVERNGDVLFST-SGLGFQWSPQE-NCFHPGGLFASVGQA-GMGF-GISPNSH 56

Query: 149 EN-------DLYVKY---------VTSSP-----EETRDGIV--MNXXXXXXXXXXXXIA 39
           +N       ++Y KY         +   P     E   + IV                I 
Sbjct: 57  DNGSKPPFANMYTKYALVQESGYKIVEVPELGVGEIAEEEIVKKKKKKKRGAVKLKIKIG 116

Query: 38  NTSLRRLVSGAI 3
           N SLRRL+SGAI
Sbjct: 117 NPSLRRLISGAI 128


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