BLASTX nr result

ID: Cnidium21_contig00032748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032748
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146486.1| PREDICTED: protein FMP32, mitochondrial-like...   301   8e-80
ref|XP_002533806.1| conserved hypothetical protein [Ricinus comm...   299   5e-79
ref|XP_002313013.1| predicted protein [Populus trichocarpa] gi|2...   298   1e-78
ref|XP_002886229.1| hypothetical protein ARALYDRAFT_900313 [Arab...   297   2e-78
ref|NP_565388.1| uncharacterized protein [Arabidopsis thaliana] ...   296   3e-78

>ref|XP_004146486.1| PREDICTED: protein FMP32, mitochondrial-like [Cucumis sativus]
           gi|449515255|ref|XP_004164665.1| PREDICTED: protein
           FMP32, mitochondrial-like [Cucumis sativus]
          Length = 249

 Score =  301 bits (772), Expect = 8e-80
 Identities = 152/192 (79%), Positives = 173/192 (90%)
 Frame = +3

Query: 42  RRISQHVNLNGSRAFLVDTLALVRRLEAQGVPSQQAEAITAAITEVLNDSLENVSHAFVS 221
           R+ISQ V  NG R FLVDTLALVR+LE QGVPS QAEAITAAITEVLNDSLEN+SH+FVS
Sbjct: 58  RQISQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVS 117

Query: 222 RAESQKGEMVQEANLSKFKAEIQSSQEHHFSLLQRETEKLQNDIGKIRSELKYEVDKVTA 401
           + E QK EM+Q++NLSKFK+E+QSSQ HHFSLL  ETEKL+NDI K+RSEL+YE+DKVTA
Sbjct: 118 KGEMQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELRYEIDKVTA 177

Query: 402 GQRLDLNLERGRTRDELSNQSTETTNLNNKIDREIQGIRAQLEGAKYDIIKYCIGTLVSV 581
           GQRLDLNLERGR RDEL+NQ+ ETTNL NK+DREI G+RAQLE AKYD+IKYCIGTLVS+
Sbjct: 178 GQRLDLNLERGRIRDELANQNAETTNLTNKLDREIHGLRAQLEAAKYDVIKYCIGTLVSI 237

Query: 582 SAVGLAILRILM 617
           SAVGLA+LRILM
Sbjct: 238 SAVGLAVLRILM 249


>ref|XP_002533806.1| conserved hypothetical protein [Ricinus communis]
           gi|223526260|gb|EEF28575.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 238

 Score =  299 bits (765), Expect = 5e-79
 Identities = 151/192 (78%), Positives = 173/192 (90%)
 Frame = +3

Query: 42  RRISQHVNLNGSRAFLVDTLALVRRLEAQGVPSQQAEAITAAITEVLNDSLENVSHAFVS 221
           R+ISQ V  NG R FLVDTLALVRRLEAQGVPS+QAEAIT AITEVLNDSLENVSH+ VS
Sbjct: 47  RQISQFVKSNGRRVFLVDTLALVRRLEAQGVPSKQAEAITGAITEVLNDSLENVSHSVVS 106

Query: 222 RAESQKGEMVQEANLSKFKAEIQSSQEHHFSLLQRETEKLQNDIGKIRSELKYEVDKVTA 401
           + E QK EM+QE NLSKFK+E+QSSQEHHFSLLQ ETEKL++DI K+RSEL++E+DKVTA
Sbjct: 107 KTEMQKTEMIQETNLSKFKSEVQSSQEHHFSLLQHETEKLRHDIEKMRSELRHEIDKVTA 166

Query: 402 GQRLDLNLERGRTRDELSNQSTETTNLNNKIDREIQGIRAQLEGAKYDIIKYCIGTLVSV 581
           GQRLDLNLERGR RDEL++Q+ ET+NL NK+DREI  +RAQLE AKYD+IKYCIGTLVS+
Sbjct: 167 GQRLDLNLERGRIRDELADQNAETSNLTNKLDREIHALRAQLEAAKYDVIKYCIGTLVSI 226

Query: 582 SAVGLAILRILM 617
           SAVGLA+LRILM
Sbjct: 227 SAVGLAVLRILM 238


>ref|XP_002313013.1| predicted protein [Populus trichocarpa] gi|222849421|gb|EEE86968.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  298 bits (762), Expect = 1e-78
 Identities = 151/199 (75%), Positives = 177/199 (88%), Gaps = 1/199 (0%)
 Frame = +3

Query: 24  GNQLSYRRISQHVNLNGS-RAFLVDTLALVRRLEAQGVPSQQAEAITAAITEVLNDSLEN 200
           GN+  YR ISQ V  N + RAFLVDTLALVR LE+QGVPS+QAEAITAAITEVLNDSLEN
Sbjct: 33  GNRFDYRHISQLVRPNNNKRAFLVDTLALVRGLESQGVPSKQAEAITAAITEVLNDSLEN 92

Query: 201 VSHAFVSRAESQKGEMVQEANLSKFKAEIQSSQEHHFSLLQRETEKLQNDIGKIRSELKY 380
           V+++FVS+AE QK EM+Q++NLSKFK+E+QSSQEHHFSLLQRETEKL+ DI K+RSEL+Y
Sbjct: 93  VAYSFVSKAEMQKSEMIQDSNLSKFKSEVQSSQEHHFSLLQRETEKLRGDIDKMRSELRY 152

Query: 381 EVDKVTAGQRLDLNLERGRTRDELSNQSTETTNLNNKIDREIQGIRAQLEGAKYDIIKYC 560
           E+DKVTAGQRLDLNLERGR RDEL+NQ+ ETTNL NK+DREI  +RA LE AKYD+IKYC
Sbjct: 153 EIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDREIHALRAHLEAAKYDVIKYC 212

Query: 561 IGTLVSVSAVGLAILRILM 617
           IGTLVS+ AVG+A +RIL+
Sbjct: 213 IGTLVSICAVGIATVRILL 231


>ref|XP_002886229.1| hypothetical protein ARALYDRAFT_900313 [Arabidopsis lyrata subsp.
           lyrata] gi|297332069|gb|EFH62488.1| hypothetical protein
           ARALYDRAFT_900313 [Arabidopsis lyrata subsp. lyrata]
          Length = 230

 Score =  297 bits (761), Expect = 2e-78
 Identities = 148/196 (75%), Positives = 177/196 (90%)
 Frame = +3

Query: 30  QLSYRRISQHVNLNGSRAFLVDTLALVRRLEAQGVPSQQAEAITAAITEVLNDSLENVSH 209
           Q  YR+ S+    NG RAFLVDTLALVR LEAQGVPS+QAEAIT+AITEVLNDSLENVS 
Sbjct: 35  QFPYRQYSELTKANGRRAFLVDTLALVRSLEAQGVPSKQAEAITSAITEVLNDSLENVSE 94

Query: 210 AFVSRAESQKGEMVQEANLSKFKAEIQSSQEHHFSLLQRETEKLQNDIGKIRSELKYEVD 389
           +FVS+AE QK EM+Q++NLSKFK+E++SSQEHHF++LQRETEKL+ DI K+RSEL+YE+D
Sbjct: 95  SFVSKAEMQKIEMIQDSNLSKFKSEVKSSQEHHFTVLQRETEKLRGDIEKMRSELRYEID 154

Query: 390 KVTAGQRLDLNLERGRTRDELSNQSTETTNLNNKIDREIQGIRAQLEGAKYDIIKYCIGT 569
           KVTAGQRLDLNLERGR RDEL+NQ+TETTNL NK+DREI  +RAQLE +KY++IKYCIGT
Sbjct: 155 KVTAGQRLDLNLERGRIRDELANQNTETTNLTNKLDREIHALRAQLEASKYEVIKYCIGT 214

Query: 570 LVSVSAVGLAILRILM 617
           LVS+SAVGLA+LRI++
Sbjct: 215 LVSISAVGLAVLRIMI 230


>ref|NP_565388.1| uncharacterized protein [Arabidopsis thaliana]
           gi|17529264|gb|AAL38859.1| unknown protein [Arabidopsis
           thaliana] gi|20198032|gb|AAD22294.2| expressed protein
           [Arabidopsis thaliana] gi|21536621|gb|AAM60953.1|
           unknown [Arabidopsis thaliana]
           gi|29824341|gb|AAP04131.1| unknown protein [Arabidopsis
           thaliana] gi|330251406|gb|AEC06500.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 230

 Score =  296 bits (758), Expect = 3e-78
 Identities = 147/193 (76%), Positives = 176/193 (91%)
 Frame = +3

Query: 39  YRRISQHVNLNGSRAFLVDTLALVRRLEAQGVPSQQAEAITAAITEVLNDSLENVSHAFV 218
           YR+ S+    NG RAFLVDTLALVR LEAQGVPS+QAEAIT+AITEVLNDSLENVS +FV
Sbjct: 38  YRQFSELTKANGRRAFLVDTLALVRSLEAQGVPSKQAEAITSAITEVLNDSLENVSESFV 97

Query: 219 SRAESQKGEMVQEANLSKFKAEIQSSQEHHFSLLQRETEKLQNDIGKIRSELKYEVDKVT 398
           S+AE QK EM+Q++NLSKFK+E++SSQEHHF++LQRETEKL+ DI K+RSEL+YE+DKVT
Sbjct: 98  SKAEMQKIEMIQDSNLSKFKSEVKSSQEHHFTVLQRETEKLRGDIEKMRSELRYEIDKVT 157

Query: 399 AGQRLDLNLERGRTRDELSNQSTETTNLNNKIDREIQGIRAQLEGAKYDIIKYCIGTLVS 578
           AGQRLDLNLERGR RDEL+NQ+TETTNL NK+DREI  +RAQLE +KY++IKYCIGTLVS
Sbjct: 158 AGQRLDLNLERGRIRDELANQNTETTNLTNKLDREIHALRAQLEASKYEVIKYCIGTLVS 217

Query: 579 VSAVGLAILRILM 617
           +SAVGLA+LRI++
Sbjct: 218 ISAVGLAVLRIMI 230


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