BLASTX nr result

ID: Cnidium21_contig00032709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032709
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854...   110   1e-22
emb|CBI23464.3| unnamed protein product [Vitis vinifera]              110   1e-22
emb|CAN68806.1| hypothetical protein VITISV_001078 [Vitis vinifera]   108   6e-22
ref|XP_002530663.1| retinoblastoma-binding protein, putative [Ri...   102   5e-20
ref|XP_002304286.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19

>ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854867 [Vitis vinifera]
          Length = 823

 Score =  110 bits (276), Expect = 1e-22
 Identities = 61/139 (43%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
 Frame = -2

Query: 552 EFAAENYMMPTGPAFNPYWSGMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHFPQD 373
           + AAENYMMP  P + PYW+GMQ                                  PQ 
Sbjct: 498 DLAAENYMMPMDPTYAPYWNGMQPGMDGFMNPYAGAMPYMGYGYNTLDMPFGGV--LPQG 555

Query: 372 PYGPPVNMMPF-PPQRNFAGYGMGYNGRPPVMSKEEFEARKADLMRKRELERHGDSRDLP 196
           P+G P  M+P  PPQR+ A +GMG N  PPVMS+EEFEARKADL R+RE ER G+S++ P
Sbjct: 556 PFGAPGYMLPVVPPQRDLADFGMGLNAAPPVMSREEFEARKADLRRRRESERRGESKEFP 615

Query: 195 KERE-SREVTSSSGVPSIK 142
           K+RE  RE +    V ++K
Sbjct: 616 KDREYGREGSMGGDVSTMK 634


>emb|CBI23464.3| unnamed protein product [Vitis vinifera]
          Length = 828

 Score =  110 bits (276), Expect = 1e-22
 Identities = 61/139 (43%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
 Frame = -2

Query: 552 EFAAENYMMPTGPAFNPYWSGMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHFPQD 373
           + AAENYMMP  P + PYW+GMQ                                  PQ 
Sbjct: 503 DLAAENYMMPMDPTYAPYWNGMQPGMDGFMNPYAGAMPYMGYGYNTLDMPFGGV--LPQG 560

Query: 372 PYGPPVNMMPF-PPQRNFAGYGMGYNGRPPVMSKEEFEARKADLMRKRELERHGDSRDLP 196
           P+G P  M+P  PPQR+ A +GMG N  PPVMS+EEFEARKADL R+RE ER G+S++ P
Sbjct: 561 PFGAPGYMLPVVPPQRDLADFGMGLNAAPPVMSREEFEARKADLRRRRESERRGESKEFP 620

Query: 195 KERE-SREVTSSSGVPSIK 142
           K+RE  RE +    V ++K
Sbjct: 621 KDREYGREGSMGGDVSTMK 639


>emb|CAN68806.1| hypothetical protein VITISV_001078 [Vitis vinifera]
          Length = 828

 Score =  108 bits (270), Expect = 6e-22
 Identities = 60/139 (43%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
 Frame = -2

Query: 552 EFAAENYMMPTGPAFNPYWSGMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHFPQD 373
           + AAENYMMP  P + PYW+GMQ                                  PQ 
Sbjct: 503 DLAAENYMMPMDPTYAPYWNGMQPGMDGFMNPYAGAMPYMGYGYNTLDMPFGGV--LPQG 560

Query: 372 PYGPPVNMMPF-PPQRNFAGYGMGYNGRPPVMSKEEFEARKADLMRKRELERHGDSRDLP 196
           P+G P  M+P  PPQR+ A +GMG N  PP MS+EEFEARKADL R+RE ER G+S++ P
Sbjct: 561 PFGAPGYMLPVVPPQRDLADFGMGLNAAPPXMSREEFEARKADLRRRRESERRGESKEFP 620

Query: 195 KERE-SREVTSSSGVPSIK 142
           K+RE  RE +    V ++K
Sbjct: 621 KDREYXREGSMGGDVSTMK 639


>ref|XP_002530663.1| retinoblastoma-binding protein, putative [Ricinus communis]
           gi|223529796|gb|EEF31732.1| retinoblastoma-binding
           protein, putative [Ricinus communis]
          Length = 868

 Score =  102 bits (253), Expect = 5e-20
 Identities = 62/145 (42%), Positives = 80/145 (55%), Gaps = 4/145 (2%)
 Frame = -2

Query: 552 EFAAENYMMPTGP-AFNPYWSGMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGH-FP 379
           + A E+YMMP GP A+NPYW+GMQ                               G   P
Sbjct: 496 DLATESYMMPLGPSAYNPYWNGMQPGMESYMNPMNPFAAPMPFMGYGMGPLDMPFGGVMP 555

Query: 378 QDPYGPPVNMMPF-PPQRNFAGYGMGYNGRPPVMSKEEFEARKADLMRKRELERHGDSRD 202
            DP+     MMP  PPQR+ A +GMG N  PP MS+EEFEARKADL R+RE ER  + R+
Sbjct: 556 PDPFSAQGYMMPVVPPQRDLADFGMGMNAGPPAMSREEFEARKADLRRRRENERRAE-RE 614

Query: 201 LPKERE-SREVTSSSGVPSIKSQSV 130
            P++RE  REV+S   + S+KS+ +
Sbjct: 615 FPRDREFGREVSSGVDISSMKSKPI 639


>ref|XP_002304286.1| predicted protein [Populus trichocarpa] gi|222841718|gb|EEE79265.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 60/143 (41%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
 Frame = -2

Query: 552 EFAAENYMMPTGP-AFNPYWSGMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHFPQ 376
           + AAE++MMP GP AFNPYWSGMQ                                  P 
Sbjct: 177 DLAAESFMMPMGPSAFNPYWSGMQTGMEGYMAPYPGPMPFMGYGLSPLDMPYGGV--MPP 234

Query: 375 DPYGPPVNMMP-FPPQRNFAGYGMGYNGRPPVMSKEEFEARKADLMRKRELERHGDSRDL 199
           DP+G    MMP  PPQR+ A +GM  N RPP+MS+EEFEARKAD+ R+RE ER  +    
Sbjct: 235 DPFGAQSYMMPAVPPQRDLAEFGMNMNLRPPLMSREEFEARKADVRRRRENERRAEREFS 294

Query: 198 PKERESREVTSSSGVPSIKSQSV 130
                 REV+    V S+KS+S+
Sbjct: 295 RDWDPGREVSGGGDVSSMKSKSI 317


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