BLASTX nr result

ID: Cnidium21_contig00032697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032697
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300777.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002886284.1| mitochondrial import inner membrane transloc...    78   6e-13
sp|Q1PF33.1|TI441_ARATH RecName: Full=Mitochondrial import inner...    78   6e-13
ref|NP_565473.1| translocase inner membrane subunit 44-1 [Arabid...    76   2e-12
ref|XP_002307643.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12

>ref|XP_002300777.1| predicted protein [Populus trichocarpa] gi|222842503|gb|EEE80050.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 46/90 (51%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
 Frame = +3

Query: 57  MASRKLVRDLLFTKQPLFRQLLAPQVSIPRTRFWLQTSDSYMGVRQLSFFDKF----KEE 224
           MASRKLVRDL  ++QPLF +L + QVS  R +       +Y G R+ S F++F    K E
Sbjct: 1   MASRKLVRDLFLSRQPLFLRLTSKQVSGRRLQVLSNHGCTYYGYRRFSVFNEFSNKVKGE 60

Query: 225 VNKNPELDQSVKELKKKAEEFKGVTENLKV 314
            ++N E  QSVKELK+KAEE KG  E LKV
Sbjct: 61  ADRNQEFKQSVKELKEKAEELKGAKEELKV 90


>ref|XP_002886284.1| mitochondrial import inner membrane translocase subunit TIM44
           [Arabidopsis lyrata subsp. lyrata]
           gi|297332124|gb|EFH62543.1| mitochondrial import inner
           membrane translocase subunit TIM44 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 477

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
 Frame = +3

Query: 57  MASRKLVRDLLFTKQPLFRQLLAPQVSIPRTRFWLQTSDSYMGVRQLSFFDKFKE----E 224
           MA+RK++RDLL TKQPL RQL   +V    TR     +  Y   R+ S F +F +    E
Sbjct: 1   MATRKIIRDLLITKQPLLRQLFHQRVLRGNTRSEFLPAIGYSSHRRFSVFSEFSKNIRGE 60

Query: 225 VNKNPELDQSVKELKKKAEEFKGVTENLKV 314
            + NPE  ++VKE K++AEEFKGV E+LKV
Sbjct: 61  ADSNPEFQRTVKEFKERAEEFKGVKEDLKV 90


>sp|Q1PF33.1|TI441_ARATH RecName: Full=Mitochondrial import inner membrane translocase
           subunit TIM44-1; Flags: Precursor
           gi|91806216|gb|ABE65836.1| mitochondrial import inner
           membrane translocase subunit TIM44 [Arabidopsis
           thaliana]
          Length = 474

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
 Frame = +3

Query: 57  MASRKLVRDLLFTKQPLFRQLLAPQVSIPRTRFWLQTSDSYMGVRQLSFFDKFKE----E 224
           MA RK++RDLL TKQPL RQL   +V     R     +  Y   R+ S F +F +    E
Sbjct: 1   MAIRKIIRDLLITKQPLLRQLFHQRVLRANARSEFLPAIGYTSHRRFSVFTEFSKNIRGE 60

Query: 225 VNKNPELDQSVKELKKKAEEFKGVTENLKV 314
            + NPE +++VKELK++ EEFKGVTE+LKV
Sbjct: 61  AHSNPEFERTVKELKERTEEFKGVTEDLKV 90


>ref|NP_565473.1| translocase inner membrane subunit 44-1 [Arabidopsis thaliana]
           gi|20198086|gb|AAD25651.2| putative mitochondrial inner
           membrane translocating protein [Arabidopsis thaliana]
           gi|330251926|gb|AEC07020.1| translocase inner membrane
           subunit 44-1 [Arabidopsis thaliana]
          Length = 472

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
 Frame = +3

Query: 57  MASRKLVRDLLFTKQPLFRQLLAPQVSIPRTRFWLQTSDSYMGVRQLSFFDKFKE----E 224
           MA RK++RDLL TKQPL RQL   + +  R+ F    +  Y   R+ S F +F +    E
Sbjct: 1   MAIRKIIRDLLITKQPLLRQLFHQRRANARSEFL--PAIGYTSHRRFSVFTEFSKNIRGE 58

Query: 225 VNKNPELDQSVKELKKKAEEFKGVTENLKV 314
            + NPE +++VKELK++ EEFKGVTE+LKV
Sbjct: 59  AHSNPEFERTVKELKERTEEFKGVTEDLKV 88


>ref|XP_002307643.1| predicted protein [Populus trichocarpa] gi|222857092|gb|EEE94639.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
 Frame = +3

Query: 57  MASRKLVRDLLFTKQPLFRQLLAPQVSIPRTRFWLQTSDSYMGVRQLSFFDKF----KEE 224
           MASRKLVRDL+ ++QPLF   ++ QV   R +        Y G R+ S F++F    K E
Sbjct: 1   MASRKLVRDLVLSRQPLFLHFISKQVPSSRLQVVSNYGCPYSGYRRFSVFNEFSKKVKGE 60

Query: 225 VNKNPELDQSVKELKKKAEEFKGVTENLKV 314
              N E  QSVKELK+KAEE KGV E LKV
Sbjct: 61  AQINLEFKQSVKELKEKAEELKGVKEELKV 90


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