BLASTX nr result

ID: Cnidium21_contig00032689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032689
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_173165.1| translation initiation factor IF-2 [Arabidopsis...    73   3e-11
gb|AAD50011.1|AC007651_6 Similar to translation initiation facto...    73   3e-11
ref|XP_002890212.1| hypothetical protein ARALYDRAFT_471925 [Arab...    73   3e-11
dbj|BAH20402.1| AT1G17220 [Arabidopsis thaliana]                       73   3e-11
gb|AAK32930.1|AF367343_1 At1g17220/F20D23_8 [Arabidopsis thalian...    73   3e-11

>ref|NP_173165.1| translation initiation factor IF-2 [Arabidopsis thaliana]
            gi|334302824|sp|Q9SHI1.2|IF2C_ARATH RecName:
            Full=Translation initiation factor IF-2, chloroplastic;
            Flags: Precursor gi|332191439|gb|AEE29560.1| translation
            initiation factor IF-2 [Arabidopsis thaliana]
          Length = 1026

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/74 (56%), Positives = 53/74 (71%)
 Frame = -3

Query: 274  VKDCGIRVVRKGKTVFVGVLNSLRRIKEAVKKSDRSVLG*SVALGLIIWLIGRIDGDTLE 95
            VKDCGIRVVRKGKTV VGVL+SL+R+KE VK+      G    +G+  +    I+GD +E
Sbjct: 944  VKDCGIRVVRKGKTVHVGVLDSLKRVKENVKEVS---AGLECGIGMDDY-DDWIEGDIIE 999

Query: 94   AFNTVQKRQTLERS 53
            AFN VQKR+TLE +
Sbjct: 1000 AFNAVQKRRTLEEA 1013


>gb|AAD50011.1|AC007651_6 Similar to translation initiation factor IF2 [Arabidopsis thaliana]
          Length = 1016

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/74 (56%), Positives = 53/74 (71%)
 Frame = -3

Query: 274  VKDCGIRVVRKGKTVFVGVLNSLRRIKEAVKKSDRSVLG*SVALGLIIWLIGRIDGDTLE 95
            VKDCGIRVVRKGKTV VGVL+SL+R+KE VK+      G    +G+  +    I+GD +E
Sbjct: 934  VKDCGIRVVRKGKTVHVGVLDSLKRVKENVKEVS---AGLECGIGMDDY-DDWIEGDIIE 989

Query: 94   AFNTVQKRQTLERS 53
            AFN VQKR+TLE +
Sbjct: 990  AFNAVQKRRTLEEA 1003


>ref|XP_002890212.1| hypothetical protein ARALYDRAFT_471925 [Arabidopsis lyrata subsp.
            lyrata] gi|297336054|gb|EFH66471.1| hypothetical protein
            ARALYDRAFT_471925 [Arabidopsis lyrata subsp. lyrata]
          Length = 1027

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/74 (56%), Positives = 53/74 (71%)
 Frame = -3

Query: 274  VKDCGIRVVRKGKTVFVGVLNSLRRIKEAVKKSDRSVLG*SVALGLIIWLIGRIDGDTLE 95
            VKDCGIRVVRKGKTV VGVL+SL+R+KE VK+      G    +G+  +    I+GD +E
Sbjct: 945  VKDCGIRVVRKGKTVHVGVLDSLKRVKENVKEVS---AGLECGIGMDDY-DDWIEGDIIE 1000

Query: 94   AFNTVQKRQTLERS 53
            AFN VQKR+TLE +
Sbjct: 1001 AFNAVQKRRTLEEA 1014


>dbj|BAH20402.1| AT1G17220 [Arabidopsis thaliana]
          Length = 796

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/74 (56%), Positives = 53/74 (71%)
 Frame = -3

Query: 274 VKDCGIRVVRKGKTVFVGVLNSLRRIKEAVKKSDRSVLG*SVALGLIIWLIGRIDGDTLE 95
           VKDCGIRVVRKGKTV VGVL+SL+R+KE VK+      G    +G+  +    I+GD +E
Sbjct: 714 VKDCGIRVVRKGKTVHVGVLDSLKRVKENVKEVS---AGLECGIGMDDY-DDWIEGDIIE 769

Query: 94  AFNTVQKRQTLERS 53
           AFN VQKR+TLE +
Sbjct: 770 AFNAVQKRRTLEEA 783


>gb|AAK32930.1|AF367343_1 At1g17220/F20D23_8 [Arabidopsis thaliana] gi|24111275|gb|AAN46761.1|
            At1g17220/F20D23_8 [Arabidopsis thaliana]
          Length = 1026

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/74 (56%), Positives = 53/74 (71%)
 Frame = -3

Query: 274  VKDCGIRVVRKGKTVFVGVLNSLRRIKEAVKKSDRSVLG*SVALGLIIWLIGRIDGDTLE 95
            VKDCGIRVVRKGKTV VGVL+SL+R+KE VK+      G    +G+  +    I+GD +E
Sbjct: 944  VKDCGIRVVRKGKTVHVGVLDSLKRVKENVKEVS---AGLECGIGMDDY-DDWIEGDIIE 999

Query: 94   AFNTVQKRQTLERS 53
            AFN VQKR+TLE +
Sbjct: 1000 AFNAVQKRRTLEEA 1013


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