BLASTX nr result

ID: Cnidium21_contig00032686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032686
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314589.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002285504.1| PREDICTED: uncharacterized protein LOC100242...    93   3e-17
ref|NP_189271.1| eukaryotic translation initiation factor 4B1 [A...    92   6e-17
ref|XP_002311758.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002875317.1| hypothetical protein ARALYDRAFT_484402 [Arab...    89   5e-16

>ref|XP_002314589.1| predicted protein [Populus trichocarpa] gi|222863629|gb|EEF00760.1|
           predicted protein [Populus trichocarpa]
          Length = 522

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 72/159 (45%), Positives = 84/159 (52%), Gaps = 25/159 (15%)
 Frame = -3

Query: 409 QSYPSLKETINSGSGRXXXXXKMSLQQF--TLSTGS----GLTPDEMMMLPKGPQSGQDG 248
           QS+PSLKE   +   +      MSL +F  T S G     GLTPDEM  LP GP+     
Sbjct: 32  QSFPSLKEAAGTAKPKKKK---MSLNEFYSTPSGGGVESKGLTPDEMFRLPTGPKERSAE 88

Query: 247 FLQPGR----FNTYGRGSGP-----QRDD----------RRSYGGFEDDGRRGDPQVRLS 125
            +Q G     F+ YGR   P      RD+          RR +GG  DD RRG P  R+S
Sbjct: 89  EMQHGHLGGGFSNYGRTGPPPGRMRDRDNTDGSWGGGGGRRQFGGGFDDERRGQPPSRVS 148

Query: 124 DYDQPSRADGVDNWAMSKKPMMNSFDRSGRNEGFSRGSG 8
           DYDQPSRAD VDNWAM+KKP   SFD SGR   +S   G
Sbjct: 149 DYDQPSRADEVDNWAMAKKP-QPSFD-SGRQSRYSSLGG 185


>ref|XP_002285504.1| PREDICTED: uncharacterized protein LOC100242447 [Vitis vinifera]
          Length = 522

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 61/156 (39%), Positives = 79/156 (50%), Gaps = 26/156 (16%)
 Frame = -3

Query: 409 QSYPSLKETINSGSGRXXXXXKMSLQQFTLSTGS----------GLTPDEMMMLPKGPQS 260
           Q +PSLKE +     +     + ++  +T S G           GLT DEM+ LP GP+ 
Sbjct: 41  QGFPSLKEAVAKPKKKKISLMEFTMGVYTDSGGDARRDSPMEYKGLTQDEMLRLPTGPKE 100

Query: 259 GQDGFLQPGR----FNTYGR------------GSGPQRDDRRSYGGFEDDGRRGDPQVRL 128
                +Q GR    F +YGR            G G    +RRSYGGF+DD R   P  R 
Sbjct: 101 RSAEEMQYGRLGGGFQSYGRSGPPSSRTRDRDGDGSWGGNRRSYGGFDDDRRAPPP--RA 158

Query: 127 SDYDQPSRADGVDNWAMSKKPMMNSFDRSGRNEGFS 20
           SD+DQPSRAD VDNWAM+KKP+ +     GR   +S
Sbjct: 159 SDFDQPSRADEVDNWAMAKKPLPSHSVDPGRPSRYS 194


>ref|NP_189271.1| eukaryotic translation initiation factor 4B1 [Arabidopsis thaliana]
           gi|9294299|dbj|BAB02201.1| eukaryotic initiation factor
           4B [Arabidopsis thaliana] gi|332643632|gb|AEE77153.1|
           eukaryotic translation initiation factor 4B1
           [Arabidopsis thaliana]
          Length = 532

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 69/167 (41%), Positives = 88/167 (52%), Gaps = 33/167 (19%)
 Frame = -3

Query: 409 QSYPSLKETI--NSGSGRXXXXXKMSLQQFTLSTGS--------GLTPDEMMMLPKGPQS 260
           QS+PSL+E     + SG+     KMSL +FT    +        GLT  E++ LP GP+ 
Sbjct: 36  QSFPSLREAAAATATSGKSRKMKKMSLSEFTTGAYTAPGGRNSVGLTQQEILQLPTGPRQ 95

Query: 259 GQDGFLQPGR----FNTYGRGSGPQ----RDD-------------RRSYGGFEDDGRRGD 143
             +  +QPGR    F++YG  SG +    RDD             RR YGG  DD RRG+
Sbjct: 96  RSEEEMQPGRLGGGFSSYGGRSGGRIGRDRDDSDGSWSGGGGGGGRRPYGGGFDDDRRGN 155

Query: 142 PQVRLSDYDQPSRADGVDNWAMSKKPMMNSFD--RSGRNEGFSRGSG 8
            Q R+SD+ QPSRAD VD+W   KKP + SFD  R GR  G   G G
Sbjct: 156 -QSRVSDFPQPSRADEVDDWGKEKKP-LPSFDQGRQGRYSGDGGGFG 200


>ref|XP_002311758.1| predicted protein [Populus trichocarpa] gi|222851578|gb|EEE89125.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 66/160 (41%), Positives = 83/160 (51%), Gaps = 26/160 (16%)
 Frame = -3

Query: 409 QSYPSLKETINSGSGRXXXXXKMSLQQFTLST------GSGLTPDEMMMLPKGPQSGQDG 248
           QS P+LKE   +   +      MSL +F  +         GLTP+ M  LP GP+   D 
Sbjct: 32  QSSPNLKEVAGTAKTKKKK---MSLNEFHSTPIGGGVESRGLTPNVMFGLPTGPKERSDE 88

Query: 247 FLQPGR----FNTYGRGSGPQ------RDD----------RRSYGGFEDDGRRGDPQVRL 128
            +Q GR    F+ YGR +GPQ      R+D          RR +GG  DD RRG    R+
Sbjct: 89  EMQYGRLGGGFSNYGR-TGPQPGHMRDREDSDGSWGGGGGRRQFGGGFDDERRGPSSSRV 147

Query: 127 SDYDQPSRADGVDNWAMSKKPMMNSFDRSGRNEGFSRGSG 8
           SDYDQPSRAD VDNWAM KKP + S+D   ++   S G G
Sbjct: 148 SDYDQPSRADEVDNWAMDKKP-LPSYDSGRQSRYGSLGGG 186


>ref|XP_002875317.1| hypothetical protein ARALYDRAFT_484402 [Arabidopsis lyrata subsp.
           lyrata] gi|297321155|gb|EFH51576.1| hypothetical protein
           ARALYDRAFT_484402 [Arabidopsis lyrata subsp. lyrata]
          Length = 528

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 67/164 (40%), Positives = 88/164 (53%), Gaps = 30/164 (18%)
 Frame = -3

Query: 409 QSYPSLKETINSGSG-RXXXXXKMSLQQFTLSTGS--------GLTPDEMMMLPKGPQSG 257
           QS+PSL+E   + +  +     KMSL +FT    +        GLT  E++ LP GP+  
Sbjct: 36  QSFPSLREAAATATNPKSRKMKKMSLSEFTTGAYTAPGGRNSVGLTQQEILQLPTGPRQR 95

Query: 256 QDGFLQPGR----FNTYGRGSGPQ----RDD-----------RRSYGGFEDDGRRGDPQV 134
            +  +QPGR    F++YG  SG +    RDD           RR YGG  DD RRG+ Q 
Sbjct: 96  SEEEMQPGRLGGGFSSYGGRSGGRMGRDRDDSDGSWGGGGGGRRPYGGGFDDDRRGN-QS 154

Query: 133 RLSDYDQPSRADGVDNWAMSKKPMMNSFD--RSGRNEGFSRGSG 8
           R+SD+ QPSRAD VD+W  +KKP + SFD  R GR  G   G G
Sbjct: 155 RVSDFAQPSRADEVDDWGKAKKP-LPSFDQGRQGRYGGGGGGFG 197