BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032683
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO19368.1| putative polyprotein [Oryza sativa Japonica Group]     176   2e-42
gb|ABF98364.1| retrotransposon protein, putative, unclassified [...   176   2e-42
gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subc...   174   5e-42
gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subc...   174   9e-42
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             173   1e-41

>gb|AAO19368.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 777

 Score =  176 bits (445), Expect = 2e-42
 Identities = 86/153 (56%), Positives = 112/153 (73%)
 Frame = +2

Query: 2   NPQKCVFGVESGKFLGFIVNHRGIEANPAKIKALQDMKSPSSMKQVQSLTGRIAALNRFV 181
           NP+KCVFGV +GK LGF+V+ RGIEANP KI A+Q MK PSS+++VQ LTGRIA L+RF+
Sbjct: 233 NPEKCVFGVRTGKLLGFLVSERGIEANPEKIDAIQQMKPPSSVREVQKLTGRIAVLSRFL 292

Query: 182 SKSTDRCREFFKAIKGVGKDFVWTPECEEAFQKIKEQLGSPPLLAKPIDREVLILYLAVS 361
           SK+ +R   FFK ++G GK F WTPEC+  F ++K+ L SPP L  P     L+LYLA S
Sbjct: 293 SKAAERGLPFFKTLRGAGK-FNWTPECQAVFDELKQYLQSPPALISPASGSELLLYLAAS 351

Query: 362 EYSISAVLVKEENDLQSPVYYVSKRLLDAETRY 460
             ++SA LV+E +  Q PVY+VS+ L  A+TRY
Sbjct: 352 PVAVSAALVQETDSGQKPVYFVSEALQGAKTRY 384


>gb|ABF98364.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 790

 Score =  176 bits (445), Expect = 2e-42
 Identities = 86/153 (56%), Positives = 112/153 (73%)
 Frame = +2

Query: 2   NPQKCVFGVESGKFLGFIVNHRGIEANPAKIKALQDMKSPSSMKQVQSLTGRIAALNRFV 181
           NP+KCVFGV +GK LGF+V+ RGIEANP KI A+Q MK PSS+++VQ LTGRIA L+RF+
Sbjct: 233 NPEKCVFGVRTGKLLGFLVSERGIEANPEKIDAIQQMKPPSSVREVQKLTGRIAVLSRFL 292

Query: 182 SKSTDRCREFFKAIKGVGKDFVWTPECEEAFQKIKEQLGSPPLLAKPIDREVLILYLAVS 361
           SK+ +R   FFK ++G GK F WTPEC+  F ++K+ L SPP L  P     L+LYLA S
Sbjct: 293 SKAAERGLPFFKTLRGAGK-FNWTPECQAVFDELKQYLQSPPALISPASGSELLLYLAAS 351

Query: 362 EYSISAVLVKEENDLQSPVYYVSKRLLDAETRY 460
             ++SA LV+E +  Q PVY+VS+ L  A+TRY
Sbjct: 352 PVAVSAALVQETDSGQKPVYFVSEALQGAKTRY 384


>gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1908

 Score =  174 bits (442), Expect = 5e-42
 Identities = 88/153 (57%), Positives = 111/153 (72%)
 Frame = +2

Query: 2    NPQKCVFGVESGKFLGFIVNHRGIEANPAKIKALQDMKSPSSMKQVQSLTGRIAALNRFV 181
            NP+KCVFGV +GK LGF+V+ RGIEANP KI A+Q MK PSS+ +VQ L GRIAAL+RF+
Sbjct: 1094 NPEKCVFGVRAGKLLGFLVSERGIEANPEKIDAIQQMKPPSSVHEVQKLAGRIAALSRFL 1153

Query: 182  SKSTDRCREFFKAIKGVGKDFVWTPECEEAFQKIKEQLGSPPLLAKPIDREVLILYLAVS 361
            SK+ +R   FFK ++G GK F WTPEC+ AF ++K+ L SPP L  P     L+LYLA S
Sbjct: 1154 SKAAERGLPFFKTLRGAGK-FNWTPECQAAFDELKQYLQSPPALISPPPGSELLLYLAAS 1212

Query: 362  EYSISAVLVKEENDLQSPVYYVSKRLLDAETRY 460
              +ISA LV+E    Q PVY+VS+ L  A+TRY
Sbjct: 1213 PVAISAALVQETESGQKPVYFVSEALQGAKTRY 1245


>gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1767

 Score =  174 bits (440), Expect = 9e-42
 Identities = 87/153 (56%), Positives = 111/153 (72%)
 Frame = +2

Query: 2    NPQKCVFGVESGKFLGFIVNHRGIEANPAKIKALQDMKSPSSMKQVQSLTGRIAALNRFV 181
            NP+KCVFGV +GK LGF+V+ RGIEANP KI A+Q MK PSS+ +VQ LTGRIAAL+RF+
Sbjct: 957  NPEKCVFGVRAGKLLGFLVSDRGIEANPEKIDAIQQMKPPSSVHEVQKLTGRIAALSRFL 1016

Query: 182  SKSTDRCREFFKAIKGVGKDFVWTPECEEAFQKIKEQLGSPPLLAKPIDREVLILYLAVS 361
            S + +R   FFK ++G GK F WTPEC+ AF ++K+ L SPP L  P     L+LYLA S
Sbjct: 1017 STAAERGLPFFKTLRGAGK-FNWTPECQAAFDELKQYLQSPPALISPPPGSELLLYLAAS 1075

Query: 362  EYSISAVLVKEENDLQSPVYYVSKRLLDAETRY 460
              ++SA LV+E    Q PVY+VS+ L  A+TRY
Sbjct: 1076 SVAVSAALVQETESGQKPVYFVSEALQGAKTRY 1108


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  173 bits (439), Expect = 1e-41
 Identities = 85/154 (55%), Positives = 113/154 (73%)
 Frame = +2

Query: 2   NPQKCVFGVESGKFLGFIVNHRGIEANPAKIKALQDMKSPSSMKQVQSLTGRIAALNRFV 181
           NP KC FGV SG+FLG+IV  RGIEAN  +I A  +M SP + K+VQ LTGRIAALNRF+
Sbjct: 207 NPAKCTFGVPSGEFLGYIVTERGIEANSNQINAFLNMPSPRNFKEVQRLTGRIAALNRFI 266

Query: 182 SKSTDRCREFFKAIKGVGKDFVWTPECEEAFQKIKEQLGSPPLLAKPIDREVLILYLAVS 361
           S+STD+   F++ +KG  K F+W  +CEEAF ++K  L +PP+L+KP   E L LY++VS
Sbjct: 267 SRSTDKSLPFYQILKG-NKGFLWDEKCEEAFGQLKAYLTTPPILSKPEVDEKLYLYVSVS 325

Query: 362 EYSISAVLVKEENDLQSPVYYVSKRLLDAETRYT 463
            +++S VLV+E+   Q P+YYVSK + D ETRYT
Sbjct: 326 NHAVSGVLVREDRGEQKPIYYVSKSMTDPETRYT 359